Gene Psyr_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2257 
Symbol 
ID3367772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2621628 
End bp2622773 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID637652607 
Productamidohydrolase 
Protein accessionYP_235338 
Protein GI66045497 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3454] Metal-dependent hydrolase involved in phosphonate metabolism 
TIGRFAM ID[TIGR02318] phosphonate metabolism protein PhnM 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.208452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.735607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG AACAGGTTTT CAGTAACGCC CGCGTGGTGA CGGCCGAGCA GGTATTCACC 
GGCACTGTGG TGGTCCGTGA CGGCCTGATT GCCGAGGTCG AGAGTGGATG CAGCCAGTTG
AGTCAGGCTC AGGACATGCA GGGCGATTAC CTGCTGCCGG GGCTGGTGGA ATTGCACACC
GACAACCTCG AAAAGCACCT GTCGCCGCGT CCGGGTGTCG ACTGGCCGTC GATGTCGGCG
GTGATCAGCC ACGATGCGCA AATCGTCGCG GCGGGGATCA CCACGGTGTT CGACGCACTG
TCGATCGGCG ACATCAACCC CAAAGGCAAG CGCATGCAAC AATTGCCCGC CATGCTGCAG
GCGATTGCCG ACGCCAACGC GGCAGGCCTG ACTCGTGCCG AGCACCTGCT GCACCTGCGC
TGCGAGGTCA GCCACCCGGA TACCTTGAGC GTGTTTCGCG ATCTGGTGGA CCAGCCACTG
GTGCAACTGG TCTCGGTGAT GGACCACGCG CCCGGCCAGC GTCAGTTTGC CCTGGAGTCC
AAGTACCGCG AGTACTACAT GGGCAAGTAC CACATGAACA ACGAGGAAAT GGACCGTTTC
ATCGTTGAAC AGGTGGCCAA CTCCAACGAG TACGCCGACC GTTACCGGCG TGCGATCGTC
GAACTGTGCC TGGCGCGCGG CCTGTCGATT GCCAGCCACG ACGATGCAAC CATGGCGCAT
GTCGAGGAGT CGGCGGGTTT CGGCATGAAC ATCGCCGAGT TCCCGACCAC ACTCGAAGCG
GCCCGTGGCT GTCGGCAACT GGGCATGAGC GTGTTGATGG GCGCACCGAA CATCGTGCGC
GGCGGCTCGC ACTCCGGTAA CGTGGCGGCA GCATCGCTGG CCACGGACGG GCTGCTGGAT
ATTCTGTCCA GCGATTACTA CCCGGCCAGC TTGTTGCAGG CTGCATTCAT GCTCGCCGCT
CAGGACAACG CATGTGACCT GCCGCAGGCG ATCAACATGG TCAGCCACAC GCCGGCCGTG
GCTGCCGGGT TGGCGGATCG TGGTGAAATA CGTGTCGGGC TGCGCGCAGA TCTGATCCAG
GCACGTGATC ATGCCGGCCT GCCGGTTATC GACAAGGTCT GGCGACAAGG CAAGAGGGTG
TTTTGA
 
Protein sequence
MLNEQVFSNA RVVTAEQVFT GTVVVRDGLI AEVESGCSQL SQAQDMQGDY LLPGLVELHT 
DNLEKHLSPR PGVDWPSMSA VISHDAQIVA AGITTVFDAL SIGDINPKGK RMQQLPAMLQ
AIADANAAGL TRAEHLLHLR CEVSHPDTLS VFRDLVDQPL VQLVSVMDHA PGQRQFALES
KYREYYMGKY HMNNEEMDRF IVEQVANSNE YADRYRRAIV ELCLARGLSI ASHDDATMAH
VEESAGFGMN IAEFPTTLEA ARGCRQLGMS VLMGAPNIVR GGSHSGNVAA ASLATDGLLD
ILSSDYYPAS LLQAAFMLAA QDNACDLPQA INMVSHTPAV AAGLADRGEI RVGLRADLIQ
ARDHAGLPVI DKVWRQGKRV F