| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2130 |
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| Symbol | |
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| ID | 3367644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2489489 |
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| End bp | 2491396 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652479 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_235211 |
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| Protein GI | 66045370 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0402618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.678263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTT CAATTGCTAC CGTATCCTTG AGCGGTACTC TGCCCGAAAA GCTCGAAGCC
ATCGCCGCAG CCGGCTTTGA CGGCGTCGAG ATTTTCGAAA ACGACTTGTT GTATTACGAC
GGCAGCCCAC GCAACATCAG GCAAATGTGT GCCGACCTGG GCATCGCCAT CACCCTGTTC
CAGCCGTTCC GCGATTTCGA AGGCTGCCGC CGTGATCGTC TGCAGCGCAA TATCGACCGT
GCCGAACGCA AATTCGATCT GATGCAGGAG CTGGGCACCG ATCTGGTGCT GGTCTGCAGC
AATGCGTCTG CCGATTCGGT GGGCGACGAA AACATTCTGC TCGATGACCT GGGCCTGCTC
GCCGAGCGCG CGGGTGCCCG TCACCTGCGC GTCGGTTATG AAGCGCTGGC CTGGGGCAAG
CACGTGAACA CCTGGCAACA GGTCTGGAAC CTGGTGCGCC AGGTCGACCA CCCGGCACTA
GGCGTGTTGC TCGACAGTTT TCATACCCTG TCGCTGAAGG GCGATCCGAG CGCCATCGCG
CAGATCCCGG GCGACAAGAT CTTCTTCGTG CAGATGGCCG ACGCGCCGCT TCTGGCGATG
GATGTGCTGG AGTGGAGCCG CCATTTCCGC TGCTTCCCGG GTCAGGGTGA ATTCGATCTG
GCCGGCTTCC TCGCGCCGAT CCTGCGCAGT GGCTATACCG GGCCGTTGTC GCTGGAAGTG
TTCAACGATG GCTTCCGTGC AGCGCCGACA CGCGCCAATG CCGCGGACGG TCTGCGTTCG
CTGCTTTATC TTGAAGAGAA AACCCGCCAG CTGATGGCGC GTGACGAGCC GGCCGCGGTT
CCCGAAATCC TCTTCAATCC GCCTGCGGCC AGTACCTACA ATGGCGTCGA GTTCCTCGAG
TTTGCCGTTG ACGAGAGCCA CGGCGCTCGC CTGTCGGGCT GGCTGCAACG GCTGGGCTTT
GCCAAGCTGG GTCAGCATCG CTCCAAGGCG GTCAGTCTGC TGGGGCAGGG CGATATCAGG
ATTGTGCTCA ATGCCGAACC CTATTCCTTC GCCCACAGTT TTTTCGAGGC GCACGGCCCT
TCGTTGTGCG CCACCGCCTT GCGCGTCGAC GACGGTCATC AGTCGCTGGA ACGCGCGCGT
GCTTTCAAGG GCCAGCCCTA TCGTGGCCTG GTCGGTCCCA ATGAACGGGA GATTCCGTCG
GTCCGCGCGC CCGACGGCAG CCTGATCTAT CTGGTGGATA ACGCCGCACC GGGAGAATCG
ATTTACGACA GCGATTTTGT CGTCGATCCG CAAGCCGTCG CCAAGGGCGG GTTGCAGCGT
ATCGACCACA TGGCCATGGC GCTGCCGGCC GACAGTCTGG ACAGCTGGGT TTTGTTCTAC
AAAAGCATTC TGGATTTCGA GGCTGACGAC GAAGTGGTCT TGCCCGACCC CTACGGCCTG
GTCAAGAGCC GGGCGCTGCG CAGCCGTTGC AGCACCGTGC GCTTGCCGTT GAATATTTCC
GAAAATCGCA ACACGGCCAT TTCCCATGCG CTGTCGAGCT ATCGCGGCTC GGGTGTGCAC
CACATCGCAT TTTCCTGCGA AGACATCTTT GCCGAGGTAA GCCGCGCCAA GGAAGCGGGC
GTACCGTTGC TGGACATCCC GCTCAACTAC TACGATGACC TGGCGGCGCG CTTCGATTTC
GACGAGGAGT TTCTCAGCGA ACTGGCGTAT TACAACGTGC TCTATGACCG CGATGCGCAG
GGTGGCGAGT TGTTCCACGT CTACACCGAT GCGTTCGACG GGCGCTTCTT CTTCGAAATC
CTGCAGCGCA AGAACGGTTA CGCAGGGTAT GGCGCTGCCA ACGTCCCGGT GCGTCTGGCT
GCGATGGCCA AGGCGCGCAA TGTGGCAGCA CGTCAGGCGC GTCTGTAA
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| Protein sequence | MQRSIATVSL SGTLPEKLEA IAAAGFDGVE IFENDLLYYD GSPRNIRQMC ADLGIAITLF
QPFRDFEGCR RDRLQRNIDR AERKFDLMQE LGTDLVLVCS NASADSVGDE NILLDDLGLL
AERAGARHLR VGYEALAWGK HVNTWQQVWN LVRQVDHPAL GVLLDSFHTL SLKGDPSAIA
QIPGDKIFFV QMADAPLLAM DVLEWSRHFR CFPGQGEFDL AGFLAPILRS GYTGPLSLEV
FNDGFRAAPT RANAADGLRS LLYLEEKTRQ LMARDEPAAV PEILFNPPAA STYNGVEFLE
FAVDESHGAR LSGWLQRLGF AKLGQHRSKA VSLLGQGDIR IVLNAEPYSF AHSFFEAHGP
SLCATALRVD DGHQSLERAR AFKGQPYRGL VGPNEREIPS VRAPDGSLIY LVDNAAPGES
IYDSDFVVDP QAVAKGGLQR IDHMAMALPA DSLDSWVLFY KSILDFEADD EVVLPDPYGL
VKSRALRSRC STVRLPLNIS ENRNTAISHA LSSYRGSGVH HIAFSCEDIF AEVSRAKEAG
VPLLDIPLNY YDDLAARFDF DEEFLSELAY YNVLYDRDAQ GGELFHVYTD AFDGRFFFEI
LQRKNGYAGY GAANVPVRLA AMAKARNVAA RQARL
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