Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2129 |
Symbol | |
ID | 3367643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2487543 |
End bp | 2488871 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652478 |
Product | major facilitator transporter |
Protein accession | YP_235210 |
Protein GI | 66045369 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.526702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.377982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAACA CCCAGACCAA CCCTGTCGCC CAGGCCGCCC GTGCCGGGAT GGGCGAAAAG ATCCGCGGCG CACTCGCCGT CGGCAAGACT CGCTGGGGCA TGCTCGCCCT GGTGTTCTTC GCCACTACGC TGAACTACAT CGACCGTGCC GCGCTCGGCG TCATGCAGCC CATCCTAGCC AAGGAAATGA GCTGGACGGC GATGGACTAC GCCAACATCA ACTTCTGGTT TCAGGTGGGT TACGCGGTCG GCTTTGTGCT GCAGGGCCGC TTCATCGACA AGGTCGGCGT GAAGCGTGCA TTCTTCCTCG CGGTGCTGCT GTGGAGCCTG GCGACCGGTG CTCACGGCCT GGCCACTTCC GCCGTCGGCT TCATGGTCTG CCGCTTCATT CTGGGCCTGA CCGAAGCCGC CAATTACCCG GCCTGTGTGA AGACCACGCG GCTGTGGTTC CCTGCCGGTG AGCGTGCAGT GGCCACCGGT ATCTTCAACG CCGGCACCAA CGTTGGTGCC ATGCTGACCC CGGCCCTGCT GCCGGTGATC CTCACGGTCT GGGGCTGGCA GGCCGCCTTC GTGGCGATGG GTTCGCTGGG GCTGCTCTGG GCTATCACCT GGCGCCTGAA GTACTACAAC CCCGAAGAGC ATCCGACCGT CAGCAAGACC GAGCTGGATT ACATCAATCA GGAAGTCGAA CCGGCTCCGG TCAAGGTGCC ATTCACCGGC ATTCTGAAGA TGCGTGGCAC ATGGGCGTTC GCGCTGGCGT ATGCGATCAC TGCTCCGGTG TTCTGGTTTT ACCTGTACTG GCTGCCGCCG TTCCTCAATC AGCAATACAA CCTGGGGATC AGCGTGACGC AGATGGGTGT TCCGCTGATT CTGATCTGGC TGACGGCCGA TTTCGGCAGT GTCGGTGGCG GTATCCTGTC GTCCTGGCTG ATTGGTCGTG GCATGCGTGC GACGACTGCG CGGCTGTTGT CGATGCTGAT CTTTGCCATC ACGATCTGCA GCGTGGTGTT CGCCGCCAAT GCCAGCGGGC TGTGGGTAGC GGTACTGGCC ATTTCGCTTG CCGTGGGTGC GCATCAGGCC TGGACGGCGA ATATCTGGAG CCTGGTGATG GACTACACCC CCAAGCACAT GATGAGTACC GTGTTCGGCT TCGGCGGCAT GTGTGCGGCC ATCGGCGGTA TGTTCATGAC GCAGATCGTG GGTGCGGTGC TGACCGCCAC CAATAACAAC TACAACGTGT TGTTCACGAT GATCCCGGCG ATGTATTTCA TTGCCCTGAT CTGGATGTAC TTCATGGCCC CTCGCAAGGT TCCGACGCTC AGCGAGTAA
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Protein sequence | MLNTQTNPVA QAARAGMGEK IRGALAVGKT RWGMLALVFF ATTLNYIDRA ALGVMQPILA KEMSWTAMDY ANINFWFQVG YAVGFVLQGR FIDKVGVKRA FFLAVLLWSL ATGAHGLATS AVGFMVCRFI LGLTEAANYP ACVKTTRLWF PAGERAVATG IFNAGTNVGA MLTPALLPVI LTVWGWQAAF VAMGSLGLLW AITWRLKYYN PEEHPTVSKT ELDYINQEVE PAPVKVPFTG ILKMRGTWAF ALAYAITAPV FWFYLYWLPP FLNQQYNLGI SVTQMGVPLI LIWLTADFGS VGGGILSSWL IGRGMRATTA RLLSMLIFAI TICSVVFAAN ASGLWVAVLA ISLAVGAHQA WTANIWSLVM DYTPKHMMST VFGFGGMCAA IGGMFMTQIV GAVLTATNNN YNVLFTMIPA MYFIALIWMY FMAPRKVPTL SE
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