Gene Psyr_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2129 
Symbol 
ID3367643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2487543 
End bp2488871 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content61% 
IMG OID637652478 
Productmajor facilitator transporter 
Protein accessionYP_235210 
Protein GI66045369 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.526702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.377982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA CCCAGACCAA CCCTGTCGCC CAGGCCGCCC GTGCCGGGAT GGGCGAAAAG 
ATCCGCGGCG CACTCGCCGT CGGCAAGACT CGCTGGGGCA TGCTCGCCCT GGTGTTCTTC
GCCACTACGC TGAACTACAT CGACCGTGCC GCGCTCGGCG TCATGCAGCC CATCCTAGCC
AAGGAAATGA GCTGGACGGC GATGGACTAC GCCAACATCA ACTTCTGGTT TCAGGTGGGT
TACGCGGTCG GCTTTGTGCT GCAGGGCCGC TTCATCGACA AGGTCGGCGT GAAGCGTGCA
TTCTTCCTCG CGGTGCTGCT GTGGAGCCTG GCGACCGGTG CTCACGGCCT GGCCACTTCC
GCCGTCGGCT TCATGGTCTG CCGCTTCATT CTGGGCCTGA CCGAAGCCGC CAATTACCCG
GCCTGTGTGA AGACCACGCG GCTGTGGTTC CCTGCCGGTG AGCGTGCAGT GGCCACCGGT
ATCTTCAACG CCGGCACCAA CGTTGGTGCC ATGCTGACCC CGGCCCTGCT GCCGGTGATC
CTCACGGTCT GGGGCTGGCA GGCCGCCTTC GTGGCGATGG GTTCGCTGGG GCTGCTCTGG
GCTATCACCT GGCGCCTGAA GTACTACAAC CCCGAAGAGC ATCCGACCGT CAGCAAGACC
GAGCTGGATT ACATCAATCA GGAAGTCGAA CCGGCTCCGG TCAAGGTGCC ATTCACCGGC
ATTCTGAAGA TGCGTGGCAC ATGGGCGTTC GCGCTGGCGT ATGCGATCAC TGCTCCGGTG
TTCTGGTTTT ACCTGTACTG GCTGCCGCCG TTCCTCAATC AGCAATACAA CCTGGGGATC
AGCGTGACGC AGATGGGTGT TCCGCTGATT CTGATCTGGC TGACGGCCGA TTTCGGCAGT
GTCGGTGGCG GTATCCTGTC GTCCTGGCTG ATTGGTCGTG GCATGCGTGC GACGACTGCG
CGGCTGTTGT CGATGCTGAT CTTTGCCATC ACGATCTGCA GCGTGGTGTT CGCCGCCAAT
GCCAGCGGGC TGTGGGTAGC GGTACTGGCC ATTTCGCTTG CCGTGGGTGC GCATCAGGCC
TGGACGGCGA ATATCTGGAG CCTGGTGATG GACTACACCC CCAAGCACAT GATGAGTACC
GTGTTCGGCT TCGGCGGCAT GTGTGCGGCC ATCGGCGGTA TGTTCATGAC GCAGATCGTG
GGTGCGGTGC TGACCGCCAC CAATAACAAC TACAACGTGT TGTTCACGAT GATCCCGGCG
ATGTATTTCA TTGCCCTGAT CTGGATGTAC TTCATGGCCC CTCGCAAGGT TCCGACGCTC
AGCGAGTAA
 
Protein sequence
MLNTQTNPVA QAARAGMGEK IRGALAVGKT RWGMLALVFF ATTLNYIDRA ALGVMQPILA 
KEMSWTAMDY ANINFWFQVG YAVGFVLQGR FIDKVGVKRA FFLAVLLWSL ATGAHGLATS
AVGFMVCRFI LGLTEAANYP ACVKTTRLWF PAGERAVATG IFNAGTNVGA MLTPALLPVI
LTVWGWQAAF VAMGSLGLLW AITWRLKYYN PEEHPTVSKT ELDYINQEVE PAPVKVPFTG
ILKMRGTWAF ALAYAITAPV FWFYLYWLPP FLNQQYNLGI SVTQMGVPLI LIWLTADFGS
VGGGILSSWL IGRGMRATTA RLLSMLIFAI TICSVVFAAN ASGLWVAVLA ISLAVGAHQA
WTANIWSLVM DYTPKHMMST VFGFGGMCAA IGGMFMTQIV GAVLTATNNN YNVLFTMIPA
MYFIALIWMY FMAPRKVPTL SE