Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2125 |
Symbol | |
ID | 3367639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2482758 |
End bp | 2484119 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637652474 |
Product | 3-carboxy-cis,cis-muconate cycloisomerase |
Protein accession | YP_235206 |
Protein GI | 66045365 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.101059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.398562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGAG CGAGCAATCA ACTTTTCGAT GCCTACTTCA TGCAACCCGA AATGCGCGAG ATCTTTTCCG ATGAAGGTCG GGTGCAGGGC ATGCTCGATT TCGAAGCTGC GCTGGCGCGG GCGCAGGCAC GGGTCGGCCT GATCCCGCCT GAAGTGGTCG CCGACATCGA GCTGAGCTGC GACGCACGGC TGTTCGATTT CGACGCGCTG GCAATCGCCA TCGGCAGTGC CGGCAATTCG GCGATTCCGC TGGTCAAGGC GCTGGGCAAA CAGATTGCCG CACGCAGCGC TGAAGCCGAG CGCTACGTGC ACATGGGCGC GACCAGTCAG GATGTGATGG ACAGCGGGCT GATCCTGCAA CTGCGTCGAG CTATCGTGCT GCTTGAGCAT GACCTTACCC GACTGGCCGA TGCGATGGCT GAGCAGGCGC AGCATCATGC TGGCACGCCG CTGGCCGGAC GCACCTGGCT GCAGCAGGCC ACGCCGGTCA CCCTGGGGAT GAAAATCGCC GGCTGGCTGG GCGCGGTCAC TCGCCATCGA CAGCGTTTGA ACGAGATCAA ACCGCGCCTG CTGTGCCTGC AGTTCGGCGG CGCTTCCGGC AGCCTCGCGG CGCTGGGCGA TCAGGCCTTT TCGGTGGCCG AAGCGCTGGC CGGTGAACTG CAGCTGGCGT TGCCCGAGCA GCCCTGGCAC ACCCAGCGCG ACCGACTGGT GGAGTTTGCC AGCCTGCTGG GCCTGATCGC CGGCAGTCTC GGCAAACTCG GGCGCGACGT GAGCCTGCTG ATGCAGACCG AAGTGGGCGA GGTCTTCGAG CCTTCGGCAC CGGGCAAAGG CGGGTCTTCG ACCATGCCGC ACAAACGCAA CCCGGTCGGC GCTGCGGTCA TGATCAGCAC CGCCACCCGC GCACCGGGGC TGGTGGCCAC GATGCTGGCG GCCATGCCGC AGGAGCACGA ACGCAGTCTG GGCCTGTGGC ATGCCGAGTG GGAGACCTTG CCGGAGCTGT GTTGTCTGGT CTCCGGTTCG CTGCAGCAGG CATTGCAGGT GATACCCGGT CTGCAGGTCG ATGCCGAGCG CATGGCGGTC AATCTGCAAT CCACCAAAGG CCTGATTCTT GCCGAGGCAG TGAGCATTGC GCTGGCTCAG CGCATCGGGC GCGATGCAGC CCACCATCTG GTTGAACAGT GCTGCCGGCG TGCGGTGGAG CAGGGCGCGC ATTTGCGTCA GGTGCTCGAC GAAACCCCGC AGGTCAGCGA GCAGTTTTCT TCTGACGAGC TGGATCGTCT GCTCGATCCG GCCCATTACC TTGGCCAGGC TCGCCATTGG GTCGAGCGCG CCGTGGCCGA ACACACAAGG ATTTCCCGAT GA
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Protein sequence | MNRASNQLFD AYFMQPEMRE IFSDEGRVQG MLDFEAALAR AQARVGLIPP EVVADIELSC DARLFDFDAL AIAIGSAGNS AIPLVKALGK QIAARSAEAE RYVHMGATSQ DVMDSGLILQ LRRAIVLLEH DLTRLADAMA EQAQHHAGTP LAGRTWLQQA TPVTLGMKIA GWLGAVTRHR QRLNEIKPRL LCLQFGGASG SLAALGDQAF SVAEALAGEL QLALPEQPWH TQRDRLVEFA SLLGLIAGSL GKLGRDVSLL MQTEVGEVFE PSAPGKGGSS TMPHKRNPVG AAVMISTATR APGLVATMLA AMPQEHERSL GLWHAEWETL PELCCLVSGS LQQALQVIPG LQVDAERMAV NLQSTKGLIL AEAVSIALAQ RIGRDAAHHL VEQCCRRAVE QGAHLRQVLD ETPQVSEQFS SDELDRLLDP AHYLGQARHW VERAVAEHTR ISR
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