Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2100 |
Symbol | |
ID | 3367614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2449326 |
End bp | 2450555 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652449 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_235181 |
Protein GI | 66045340 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.856464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00707192 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAAC TCAAACTGGT GATGATCGGC AACGGCATGG CCGGCGTGCG CACACTCGAA GAGTTGCTGA AACTGAGCGA AGACCTTTAC CACATCACGG TCTTCGGGGC CGAGCCACAC CCCAATTACA ATCGCATCCT GCTGTCGCCG GTGCTGGCCG GCGAACAGAA TTTCGAAGAC ATCGTGCTCA ACGATCTCGA CTGGTACCAA CGCAACGGTA TCGAGTTGTT GCTCAACCGC CGCGTGGTGA AGATCGATCG CATCAAACGC CTGGTGATCG CCGATGACGG CACCCAGGCC CATTATGATC GGCTGCTGAT TGCCACCGGT TCGCGGCCGT TCATACTGCC GATACCCGGC AACACGCTGA ACGGCGTCAT CGGTTATCGC GACATCAGCC ACACGCGGCA GATGATCGAC ACCGCCGTCA CGCACAAACG CGCAGTCGTC ATCGGCGGCG GCCTGCTCGG CCTGGAAGCG GCCAACGGCT TGAGCCTGCG CGGCATGCAA GTCACGGTTA TTCATAATGG CCAGACGCTG CTGGAGCGCC AACTGGACAA GACCAGCGGG CGGATGCTGC AAGCGGCACT GGAAAAGCGC GGCCTGAGCT TTCGCCTCGA CGAACAGACC AACGCCCTGC TCGGCGATGA TCAGGGCCGC GTAACCGCGG TGCAATTCAA CAACGGCGAC AGAATCGATG CCGATCTGGT GGTCATGGCC GCAGGCATAC GGCCCAATAC CGAATTGGCC GAGCAAGCCG GCCTGCCCTG TAACCGCGGC ATTCTGGTCA ATGACACCTT GCAGACCTAC GACCCGCGCA TCTACGCGAT TGGCGAATGC GTCAGCCACC GCGGCATTGC CTATGGGCTG GTGGCGCCGC TGTTCGAGCA GGCGCGGGTC TGCGCCAATC ACCTTGCGCA ACTGGGCTTC GCGCGTTATC CGGGTTCGGT CACCTCGACC AAGCTTAAAG TCACCGGCAT CGACCTGTTT TCCGCCGGGG ATTTCCTCGG CGGTGAAGGC ACTGAAAGCA TCACCCTTTC CGATCCCATT GGCGGCGTCT ACAAGAAGCT GGTGATCAAG AACGACGTAC TGGTCGGCGC CTGCCTGTAC GGCGACACCG CCGACGGCAA CTGGTACTTG CAGCAGATCC GTGATGGCCA GGGAATCGAC GCCATACGCG ATCATCTGAT GTTCGGCAAA CCCGCTGCTG CGCAGGCGGC CTGCGCATGA
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Protein sequence | MTKLKLVMIG NGMAGVRTLE ELLKLSEDLY HITVFGAEPH PNYNRILLSP VLAGEQNFED IVLNDLDWYQ RNGIELLLNR RVVKIDRIKR LVIADDGTQA HYDRLLIATG SRPFILPIPG NTLNGVIGYR DISHTRQMID TAVTHKRAVV IGGGLLGLEA ANGLSLRGMQ VTVIHNGQTL LERQLDKTSG RMLQAALEKR GLSFRLDEQT NALLGDDQGR VTAVQFNNGD RIDADLVVMA AGIRPNTELA EQAGLPCNRG ILVNDTLQTY DPRIYAIGEC VSHRGIAYGL VAPLFEQARV CANHLAQLGF ARYPGSVTST KLKVTGIDLF SAGDFLGGEG TESITLSDPI GGVYKKLVIK NDVLVGACLY GDTADGNWYL QQIRDGQGID AIRDHLMFGK PAAAQAACA
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