Gene Psyr_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2100 
Symbol 
ID3367614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2449326 
End bp2450555 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content61% 
IMG OID637652449 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_235181 
Protein GI66045340 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID[TIGR02374] nitrite reductase [NAD(P)H], large subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.856464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00707192 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAAC TCAAACTGGT GATGATCGGC AACGGCATGG CCGGCGTGCG CACACTCGAA 
GAGTTGCTGA AACTGAGCGA AGACCTTTAC CACATCACGG TCTTCGGGGC CGAGCCACAC
CCCAATTACA ATCGCATCCT GCTGTCGCCG GTGCTGGCCG GCGAACAGAA TTTCGAAGAC
ATCGTGCTCA ACGATCTCGA CTGGTACCAA CGCAACGGTA TCGAGTTGTT GCTCAACCGC
CGCGTGGTGA AGATCGATCG CATCAAACGC CTGGTGATCG CCGATGACGG CACCCAGGCC
CATTATGATC GGCTGCTGAT TGCCACCGGT TCGCGGCCGT TCATACTGCC GATACCCGGC
AACACGCTGA ACGGCGTCAT CGGTTATCGC GACATCAGCC ACACGCGGCA GATGATCGAC
ACCGCCGTCA CGCACAAACG CGCAGTCGTC ATCGGCGGCG GCCTGCTCGG CCTGGAAGCG
GCCAACGGCT TGAGCCTGCG CGGCATGCAA GTCACGGTTA TTCATAATGG CCAGACGCTG
CTGGAGCGCC AACTGGACAA GACCAGCGGG CGGATGCTGC AAGCGGCACT GGAAAAGCGC
GGCCTGAGCT TTCGCCTCGA CGAACAGACC AACGCCCTGC TCGGCGATGA TCAGGGCCGC
GTAACCGCGG TGCAATTCAA CAACGGCGAC AGAATCGATG CCGATCTGGT GGTCATGGCC
GCAGGCATAC GGCCCAATAC CGAATTGGCC GAGCAAGCCG GCCTGCCCTG TAACCGCGGC
ATTCTGGTCA ATGACACCTT GCAGACCTAC GACCCGCGCA TCTACGCGAT TGGCGAATGC
GTCAGCCACC GCGGCATTGC CTATGGGCTG GTGGCGCCGC TGTTCGAGCA GGCGCGGGTC
TGCGCCAATC ACCTTGCGCA ACTGGGCTTC GCGCGTTATC CGGGTTCGGT CACCTCGACC
AAGCTTAAAG TCACCGGCAT CGACCTGTTT TCCGCCGGGG ATTTCCTCGG CGGTGAAGGC
ACTGAAAGCA TCACCCTTTC CGATCCCATT GGCGGCGTCT ACAAGAAGCT GGTGATCAAG
AACGACGTAC TGGTCGGCGC CTGCCTGTAC GGCGACACCG CCGACGGCAA CTGGTACTTG
CAGCAGATCC GTGATGGCCA GGGAATCGAC GCCATACGCG ATCATCTGAT GTTCGGCAAA
CCCGCTGCTG CGCAGGCGGC CTGCGCATGA
 
Protein sequence
MTKLKLVMIG NGMAGVRTLE ELLKLSEDLY HITVFGAEPH PNYNRILLSP VLAGEQNFED 
IVLNDLDWYQ RNGIELLLNR RVVKIDRIKR LVIADDGTQA HYDRLLIATG SRPFILPIPG
NTLNGVIGYR DISHTRQMID TAVTHKRAVV IGGGLLGLEA ANGLSLRGMQ VTVIHNGQTL
LERQLDKTSG RMLQAALEKR GLSFRLDEQT NALLGDDQGR VTAVQFNNGD RIDADLVVMA
AGIRPNTELA EQAGLPCNRG ILVNDTLQTY DPRIYAIGEC VSHRGIAYGL VAPLFEQARV
CANHLAQLGF ARYPGSVTST KLKVTGIDLF SAGDFLGGEG TESITLSDPI GGVYKKLVIK
NDVLVGACLY GDTADGNWYL QQIRDGQGID AIRDHLMFGK PAAAQAACA