| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2099 |
|---|
| Symbol | |
|---|
| ID | 3367613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2446609 |
|---|
| End bp | 2449329 |
|---|
| Gene Length | 2721 bp |
|---|
| Protein Length | 906 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637652448 |
|---|
| Product | molybdopterin oxidoreductase:molydopterin dinucleotide-binding region:molybdopterin oxidoreductase Fe4S4 region:BFD-like [2Fe-2S]-binding region |
|---|
| Protein accession | YP_235180 |
|---|
| Protein GI | 66045339 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0090203 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC TTGCCCTTCA CACCCCTCGG ATCACGGCAT CGACCTGCTG CTATTGCGGC
GTTGGCTGCG GCGTACTGAT CGAACATGAC GGCGAGCATA TTCTCGGCGT CAGCGGCGAC
CCGAAGCACC CGGCCAACTT CGGCAAGCTG TGCAGCAAAG GTTCGAGCCT GCACCTGACC
GGCGACATCG AAGCCCGCGC GCTGTACCCG GAACTGCGCC TGAGCAAGGG CCTGGCGCGC
AGCGTGACCC ATTGGGATAC CGCACTGGAA CACGCGGCCA ATGTGTTTGC CCAGACCATT
CGCGAACATG GCCCCGACAG CGTTGCCTTC TACATTTCCG GCCAGTTGCT GACCGAAGAC
TATTACGCGT TCAACAAGCT GGCGCGCGCC CTGATCGGCA CCAACAATAT CGACAGCAAC
TCACGGCTGT GCATGTCCTC GGCCGTGGCT GGCTACAAGC GCAGCCTGGG TGCCGATGCA
CCGCCCTGCA GCTACGAAGA TATCGAACTG AGCGACTGCG TGATGATCGT CGGCAGTAAC
ATGGCGTACG CGCACCCGAT TCTGTTTCGT CGTCTGGAAG AAGCAAAAAA CCATCGTCCG
CAGATGAAAC TCATCGTCAT CGACCCACGG CGCACCGACA CCTGCGAACT GGCCGACCTG
CACCTGGCGA TTCAGCCCGG CACAGACGTC GCGCTGTTTC ACGGCATCCT GCATATATTG
ATGAGCGAAC GGCTGATCGA CCCGGCGTTC ATTGCCGCGC ACACGCAGGG CTATGAGGAA
CTGGCCACGC TGGTCCATGA TTACCCGCCT GAGCACGTGG CCGCCCTCTG CGGCATTACT
CTGGAACAGC TGCACACCTG CGCCCGCTGG GTGGGCGAAG CGCCGGCTTT TCTGTCGCTG
TGGTGCATGG GGCTGAATCA GTCTACGGCC GGCAGTGCGA AAAACAGCGC GCTGATCAAC
CTGCACCTGG CGACCGGCCA GATTGGCAAA CCTGGCGCAG GTCCCTTCTC GCTCACCGGC
CAGCCCAACG CCATGGGCGG ACGCGAAACC GGCAGCCTGT CCAACCTGTT GCCTGGCCAT
CGCGACGCGG CAAATCCTCA GCATCGTCAG GAGGTTGCAG ATTACTGGGG CGTCGACAGT
CTGCCCGCCA GCCCCGGCCT TTCCGCCATC GAACTGTTCG AGCAAATGCA AAACGGGACA
ATCAAAGCCC TGTGGATTGC CTGCACCAAC CCGGCACAGT CACTGCCCGA TCAGAACCGC
ATCAGGCAAG CGCTGGAAAC CTGCCCGTTC GTGGTACTCC AGGAAGCGTT CAAAACCACC
GAAACTGCGC GTTACGCCGA TCTGTTGCTG CCTGCTGCCA GCTGGGGCGA GAAAGAAGGC
ACGGTGACCA ACTCCGAACG GCGCATCTCC AACGTGCGCA AGGCCATCCA GGCGCCCGGC
GAAGCGCGCT CCGACTGGGC AATCACGGTG GATTTCGCCC AGCGCCTGCA ACAACGCCTG
CAACCCGACG CCCCCGCGCT GTTCGATTTC GCGACACCCA AAGCCTTGTT CGATGAGTTC
AAGGGCCTGA CAGTCGGGCG CGATCTGGAC ATGTCCGGGA TCGACCGCGA GCTCATCGAC
CAGCAGGGCC CGCAGCAATG GCCCTTCCCG CGTGGCGCCA GCAGCGGCAC ACAGCGCCTG
TACAGCGAGG GTATCTTTCC CACCGATTCA GGCCGCGCGC AGTTTCTGTC CGAGCCTTAC
ATCGCCGCCA GGGAATTGCG CGATGCCGAC TACCCACTGA CGCTCAATAC CGGCAGGCTG
CGTGATCAAT GGCACGGCAT GAGCCGCACC GGCACCGCTG CGCGCTTGTT CGGGCATGTC
AGCGAAGCTG TGTTGAGCAT CAATCCGCAG GACATGCTCA GCCATGACCT GCAGCCCGGC
GATCTGGTCA AACTGATCAG CCGGCGCGGC GAGCTGCTGT TGCCGGTCAG CAGTGAGGAC
AGCGTTGCAG TCGGCCAGGC CTTTGTGCCG ATGCATTGGG GCGACAGGTT CCTCAAGGGG
GGTGTCAACG TTCTCACCCA GCCGGCCTTC GATCCGATCT CGAAACAACC GGAACTCAAG
CACGCCGGCG TCAGGATCGA AAAAGCCCAC CTGCCCTGGC AGTTCTTTGC GCTGGTCGAG
GGCAACGTGC AGCAACGGAT GGAAACGCTG CGCGCCTTGT GTGACACCTT CACTTACCTG
AGCATGGGCC TTGCCGGACG CGGGCGACCG GCTCTGGTAA TACGCGCCGC CAGCGCAGAA
GCACCCGATT CAGCGCTGCT GCAGCAGATT GATCGTGTAC TGGGCCTGGA TGAGGGACCG
GTCATGGCGT ATGACGACCC CAAACGCTCG ATCGGCAAGC GGGTACGGAT TGACGATGAT
CGTATTACCG CTATTCGCTT GGCCGGCGAA ACACTTGCCC GGCATTGGTT GCAGACGTTG
TGGCTGGAAG AGCGCGTTGA GGCTTCGTTG CGACGCTGGC TGTTGGCACC GTTGAGCAGC
GAACCGGGCA AAGACTCGAC ACAGACTCGC GACAAGACCT TGTGCAACTG CATGAATGTC
AGCCAGAACG CAGTCATGAG CGCTATCGAG CGTGGGCTGG ACCTGAATCA ACTCAAGACA
CAGTTGGGCT GCGGCACCCA GTGCGGCTCC TGCGTGCCGG AAATAAGAAG ACTGATCCAT
ACCGTGGCGG TTACAGAATG A
|
|---|
| Protein sequence | MNSLALHTPR ITASTCCYCG VGCGVLIEHD GEHILGVSGD PKHPANFGKL CSKGSSLHLT
GDIEARALYP ELRLSKGLAR SVTHWDTALE HAANVFAQTI REHGPDSVAF YISGQLLTED
YYAFNKLARA LIGTNNIDSN SRLCMSSAVA GYKRSLGADA PPCSYEDIEL SDCVMIVGSN
MAYAHPILFR RLEEAKNHRP QMKLIVIDPR RTDTCELADL HLAIQPGTDV ALFHGILHIL
MSERLIDPAF IAAHTQGYEE LATLVHDYPP EHVAALCGIT LEQLHTCARW VGEAPAFLSL
WCMGLNQSTA GSAKNSALIN LHLATGQIGK PGAGPFSLTG QPNAMGGRET GSLSNLLPGH
RDAANPQHRQ EVADYWGVDS LPASPGLSAI ELFEQMQNGT IKALWIACTN PAQSLPDQNR
IRQALETCPF VVLQEAFKTT ETARYADLLL PAASWGEKEG TVTNSERRIS NVRKAIQAPG
EARSDWAITV DFAQRLQQRL QPDAPALFDF ATPKALFDEF KGLTVGRDLD MSGIDRELID
QQGPQQWPFP RGASSGTQRL YSEGIFPTDS GRAQFLSEPY IAARELRDAD YPLTLNTGRL
RDQWHGMSRT GTAARLFGHV SEAVLSINPQ DMLSHDLQPG DLVKLISRRG ELLLPVSSED
SVAVGQAFVP MHWGDRFLKG GVNVLTQPAF DPISKQPELK HAGVRIEKAH LPWQFFALVE
GNVQQRMETL RALCDTFTYL SMGLAGRGRP ALVIRAASAE APDSALLQQI DRVLGLDEGP
VMAYDDPKRS IGKRVRIDDD RITAIRLAGE TLARHWLQTL WLEERVEASL RRWLLAPLSS
EPGKDSTQTR DKTLCNCMNV SQNAVMSAIE RGLDLNQLKT QLGCGTQCGS CVPEIRRLIH
TVAVTE
|
|---|
| |