Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2084 |
Symbol | |
ID | 3367598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2429677 |
End bp | 2430396 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652433 |
Product | transcriptional regulator GntR |
Protein accession | YP_235165 |
Protein GI | 66045324 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.853758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00432704 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGAAGA TGGTCGAAAA AACCATGACG GTTGCGGACG ACTCGGAAAC GCTCTCCGAG AACGTTTTTC GACGTATTCA ATCGGCCATC GTGAAAGGCG AGATTGCTCC CGGCAGCAAG ATTTCCGAGC CGGAACTGGC TCGCACCTAT GGCATCAGTC GCGGGCCGCT GCGCGAAGCG ATTCACCGGC TCGAAGGGCA GCGACTGGTG GTTCGCGTGC CGCATGTGGG CGCCCGGGTG GTCTCGCTCA GTCATGCCGA ACTGATCGAA CTCTATGAAA TTCGCGAGTC ACTGGAGGGG ATGGCCTGTC GTCTGGCCGC CGAACGCATG ACGCAGGCCG AAATCGATGA GCTGCGCGGC GTTCTGGATA CCCACGAGCG CGATGCCGCC TTTCAGGCAG GTATCGGCTA TTACCAGCAG GAGGGTGATT TCGACTTTCA CTACCGCATC ATTCAGGGCA GCGGCAATCG CACCCTCAGC CAGATGCTCT GCGGCGAGCT CTACCAGTTG GTGCGCATGT ACCGCATTCA GTATTCCACC ACGCCCAACC GGCCTCGCCA GGCCTTTGCC GAACATCACC GCATTCTCGA CGCCATCGCC GACCGCGACG GTGAGCTGGC CGAATTGTTG ATGCGCCGCC ATATCGGCGC GTCCAGACGC AACATCGAAC GCCACTATCA GGCGGCTTCC CAGACGACTT CCGACCGAGG TAAACAATGA
|
Protein sequence | MLKMVEKTMT VADDSETLSE NVFRRIQSAI VKGEIAPGSK ISEPELARTY GISRGPLREA IHRLEGQRLV VRVPHVGARV VSLSHAELIE LYEIRESLEG MACRLAAERM TQAEIDELRG VLDTHERDAA FQAGIGYYQQ EGDFDFHYRI IQGSGNRTLS QMLCGELYQL VRMYRIQYST TPNRPRQAFA EHHRILDAIA DRDGELAELL MRRHIGASRR NIERHYQAAS QTTSDRGKQ
|
| |