Gene Psyr_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2084 
Symbol 
ID3367598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2429677 
End bp2430396 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID637652433 
Producttranscriptional regulator GntR 
Protein accessionYP_235165 
Protein GI66045324 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.853758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00432704 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAGA TGGTCGAAAA AACCATGACG GTTGCGGACG ACTCGGAAAC GCTCTCCGAG 
AACGTTTTTC GACGTATTCA ATCGGCCATC GTGAAAGGCG AGATTGCTCC CGGCAGCAAG
ATTTCCGAGC CGGAACTGGC TCGCACCTAT GGCATCAGTC GCGGGCCGCT GCGCGAAGCG
ATTCACCGGC TCGAAGGGCA GCGACTGGTG GTTCGCGTGC CGCATGTGGG CGCCCGGGTG
GTCTCGCTCA GTCATGCCGA ACTGATCGAA CTCTATGAAA TTCGCGAGTC ACTGGAGGGG
ATGGCCTGTC GTCTGGCCGC CGAACGCATG ACGCAGGCCG AAATCGATGA GCTGCGCGGC
GTTCTGGATA CCCACGAGCG CGATGCCGCC TTTCAGGCAG GTATCGGCTA TTACCAGCAG
GAGGGTGATT TCGACTTTCA CTACCGCATC ATTCAGGGCA GCGGCAATCG CACCCTCAGC
CAGATGCTCT GCGGCGAGCT CTACCAGTTG GTGCGCATGT ACCGCATTCA GTATTCCACC
ACGCCCAACC GGCCTCGCCA GGCCTTTGCC GAACATCACC GCATTCTCGA CGCCATCGCC
GACCGCGACG GTGAGCTGGC CGAATTGTTG ATGCGCCGCC ATATCGGCGC GTCCAGACGC
AACATCGAAC GCCACTATCA GGCGGCTTCC CAGACGACTT CCGACCGAGG TAAACAATGA
 
Protein sequence
MLKMVEKTMT VADDSETLSE NVFRRIQSAI VKGEIAPGSK ISEPELARTY GISRGPLREA 
IHRLEGQRLV VRVPHVGARV VSLSHAELIE LYEIRESLEG MACRLAAERM TQAEIDELRG
VLDTHERDAA FQAGIGYYQQ EGDFDFHYRI IQGSGNRTLS QMLCGELYQL VRMYRIQYST
TPNRPRQAFA EHHRILDAIA DRDGELAELL MRRHIGASRR NIERHYQAAS QTTSDRGKQ