Gene Psyr_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2078 
Symbol 
ID3367592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2423281 
End bp2424015 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID637652427 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_235159 
Protein GI66045318 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.634156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00442087 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAAC CTTTCGACGT CGCTGAACTG GCGACGACCT ATGCGACCAA ATCTGCACAA 
GACATTCTGA AACTGGCCTT CGAGCACTTC GGCGACGACC TGTGGATCTC TTTCAGCGGT
GCCGAGGACG TGGTTCTGGT CGACATGGCC TGGAAGCTGA ACAAGAACGT CAAGGTCTTC
AGCCTGGATA CAGGGCGCCT GCATGCGCAA ACCTATCGCT TCATCGAGCA GGTCCGCGAG
CACTACAAGA TCGAGATCGA GATCGTTTCG CCCGATCACA GCAAGCTTGA ACCTTTCGTC
AAGGAAAAGG GCCTGTTCAG CTTTTACCGG GACGGCCATG GCGAATGCTG CGGCATCCGC
AAGATCGAGC CGCTGCGTCG CAAACTGTCT GGCGTCAGCG CCTGGGCAAC CGGCCAGCGC
CGTGATCAGA GCCCCGGCAC CCGCAGCGCC GTTGCTGCAG TGGAAATCGA CAGCGCTTTT
TCGACAGCCG AGCGCACGCT GTACAAATTC AACCCGTTGG CACAAATGAG CAGCGAGGAA
ATCTGGGGCT ACATCCGCAT GCTGGAGCTG CCCTACAACA GCCTGCACGA GCGCGGCTTC
ATCAGCATCG GCTGCGAACC CTGCACCCGC CCGGTATTGC CGAACCAGCA CGAGCGCGAA
GGTCGCTGGT GGTGGGAAGA AGCCACGCAG AAGGAATGCG GGCTGCATGC GGGCAATCTG
ATAGTGCGCG ACTAA
 
Protein sequence
MSQPFDVAEL ATTYATKSAQ DILKLAFEHF GDDLWISFSG AEDVVLVDMA WKLNKNVKVF 
SLDTGRLHAQ TYRFIEQVRE HYKIEIEIVS PDHSKLEPFV KEKGLFSFYR DGHGECCGIR
KIEPLRRKLS GVSAWATGQR RDQSPGTRSA VAAVEIDSAF STAERTLYKF NPLAQMSSEE
IWGYIRMLEL PYNSLHERGF ISIGCEPCTR PVLPNQHERE GRWWWEEATQ KECGLHAGNL
IVRD