Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2076 |
Symbol | |
ID | 3367590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2421536 |
End bp | 2422030 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652425 |
Product | hypothetical protein |
Protein accession | YP_235157 |
Protein GI | 66045316 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.969502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00116153 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTTCGTT CGATGCTGTA TGCCGCAGAC CTCGGTCTGT ACGCGCCTTA TGTAACGCAG CACGCGCTGG CGCTGGCTCG AACGTTCAAC GCCGAGCTGT ACGTCATCCA TGTCGTCGAG CCTCTGGGCC TGTTCGCCGA GTCGGTGCTG CAGAGTTACC TGGGCGAGGA AGCGTTGAAA GAGCTTCGCG GCAAAGGTGT GAATGCATTT TTGAGTGGAA TAGAGCAACG AATGCTCGAC GGGTTTCGTG AAGAGTTGGG CGAAGGGCAC TCGGACCTTT CCCTGATTCG TACGGTGCGC GTCGTGCAGG GCGAGCCTGC CAGCGTGATT CTCGAACAGG CGCACAAGCT GGATGTGGAT TTGCTTGTGG TCGGCAGTCA CAGCCGCAGC ATGGAAGAGG GCTCCTCCAT AGGCCGGACG GCTGCCAGGG TCCTGCAGTT TTCCGCTGTG CCGGTCTACA TGGTTCCGAT GATGTTGAAA AAGGTGCGGG GGTAG
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Protein sequence | MVRSMLYAAD LGLYAPYVTQ HALALARTFN AELYVIHVVE PLGLFAESVL QSYLGEEALK ELRGKGVNAF LSGIEQRMLD GFREELGEGH SDLSLIRTVR VVQGEPASVI LEQAHKLDVD LLVVGSHSRS MEEGSSIGRT AARVLQFSAV PVYMVPMMLK KVRG
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