Gene Psyr_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2047 
Symbol 
ID3367561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2390109 
End bp2391803 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content64% 
IMG OID637652396 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_235128 
Protein GI66045287 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.931973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.439277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGTT ACGATTATCT GTTGATCCTG GCCTTTCTGG TCCTGCTGCT GGCCCCCGCG 
CCGTGGCTGG GGCGTTTCTA TTACCGGGTC ATGGAAGGCG AGCGCACCTG GCTGAGCCCG
TTGCTGGGGC CGGTCGAGCG CGCCTGCTAC CGGATCTCCG GCGTCGACCC GAAAACCGAG
CAGTCCTGGC AGCAATACGC CTGGGCCTTG CTGGCGTTCA ACCTGGCGGG CTTTGTCGTG
CTGTTCGCCA TCCTCATGCT GCAAGGCGTG CTGCCGCTCA ACCCGCAGCA ACTGCCGGGC
ATGGAATGGT CGCTGGCCTT CAACACCACC ATGAGCTTTG TCGCCAACAC CAACTGGCAG
GCCTTCAGCG GCGAAGCGTC GCTCAGCTAC CTGAGCCAGA TGGTCGGCCT GACCGTGCAG
AACTTCGTCA GCGCCGCGAC CGGCCTGGCA GTACTGGTGG CACTGTGTCG CGGCATCAGT
CGTCGCTCAT CGCAGAGCCT GGGTAACTTC TGGGCCGACA TGACCCGCGC CACGCTCTAC
GGCCTGTTGC CGATCAGTAT CGTGCTGGCG GTGTTTCTGG TCTGGCAGGG CGTGCCACAG
AACTTCGGCC ACTACATCGA CGCGCTGACC CTGCAGGGTG CTGATCAGAG CCTGCCGATG
GGCCCTGCGG CCAGTCAGAT CTCCATCAAG CAACTGGGCA CCAATGGTGG CGGCTTCTTC
GGCGTCAACT CGGCGCATCC GTTCGAGAAC CCCACGGCCT GGAGCAACCT GTTCGAACTG
GTGTCGATCC TGCTGATCCC GGCTGCACTG GTGTTCACCT TCGGCCATTA CGTCAAGGAC
ATGCGCCAGA GCCGCGCGAT CCTGGGCTGC ATGCTGGCAT TGCTGCTGAT CGGCGGTGCG
GTCTCGCTGT GGGCCGAGTA CCAGCCTAAC CCGGCGCTGA ACATCGCCGG TGTCGAGCAG
ACCGCACCGC TGGAAGGCAA GGAAACCCGC TTTGGCACCA CCGGCACGGT GCTCTGGTCA
GTCGCTACCA CTGCGGCGTC CAACGGCTCG GTCAACGGCA TGCATGACAG CCTCAACCCG
CTGACCGGCA TGGTCGCGCT GGTCAACATG ATGGTCGGCG AAGTGATCTT CGGCGGCGTC
GGTGTCGGCC TCAACGGCAT GCTGCTCAAC GTGCTTATCG CTGTGTTCCT CGCGGGTCTG
ATGATTGGCC GCACCCCGGA ATACCTGGGC AAGAAGCTGC AGGCGCAGGA AGTCCGGCTG
CTGGTCGCGA CCTTGCTGGT GATGCCGGTC GGCGTGCTGG TGCTGGGCGC GATTGCCGCG
AGCCTGCCCG GCCCGGCCGG TGCCGTCAGC AACCCCGGCC CGCATGGCTT CAGTCAGTTG
CTGTACGCCT ACACCTCGGC CACGGCCAAC AACGGTTCGG CGTTCGGCGG TTTCAGTGCC
AACACCGTGT TCCACAACCT GATGCTCAGC CTGGCGATTT TCATCGGCCG CTTCGGCTAC
ATCCTGCCGG TGCTGGCCCT GGCCGGTAGC CTGGCCATGA AGAAGGCCGC GCCGCAGGGC
CAGAACAGCT TCCCGACCCA TGGCCTGCTG TTCGTCACCC TGTTGACCGT CACGATTCTG
CTGGTGGGTG GCTTGACCTT CCTGCCGACC CTGGCACTGG GGCCGATTGC CGAACACCTG
AGCCTGGGTT TCTGA
 
Protein sequence
MHSYDYLLIL AFLVLLLAPA PWLGRFYYRV MEGERTWLSP LLGPVERACY RISGVDPKTE 
QSWQQYAWAL LAFNLAGFVV LFAILMLQGV LPLNPQQLPG MEWSLAFNTT MSFVANTNWQ
AFSGEASLSY LSQMVGLTVQ NFVSAATGLA VLVALCRGIS RRSSQSLGNF WADMTRATLY
GLLPISIVLA VFLVWQGVPQ NFGHYIDALT LQGADQSLPM GPAASQISIK QLGTNGGGFF
GVNSAHPFEN PTAWSNLFEL VSILLIPAAL VFTFGHYVKD MRQSRAILGC MLALLLIGGA
VSLWAEYQPN PALNIAGVEQ TAPLEGKETR FGTTGTVLWS VATTAASNGS VNGMHDSLNP
LTGMVALVNM MVGEVIFGGV GVGLNGMLLN VLIAVFLAGL MIGRTPEYLG KKLQAQEVRL
LVATLLVMPV GVLVLGAIAA SLPGPAGAVS NPGPHGFSQL LYAYTSATAN NGSAFGGFSA
NTVFHNLMLS LAIFIGRFGY ILPVLALAGS LAMKKAAPQG QNSFPTHGLL FVTLLTVTIL
LVGGLTFLPT LALGPIAEHL SLGF