Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2010 |
Symbol | |
ID | 3367524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2332534 |
End bp | 2333769 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652359 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_235091 |
Protein GI | 66045250 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00422001 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.333592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCG AGATCAAAGC CCCCTCTTTC CCGGAATCCG TTGCCGACGG CACCATTTCC AAGTGGTACA AAAAAGAGGG CGATGCGGTA AAGCGCGACG AGATGCTGGT CGATATCGAG ACTGACAAGG TTGTCCTCGA AGTGCTGGCC GAAGCTGACG GCGTGATGGG AACGATCACC AAGGAAGAGG GTGCCATCGT CCTGTCCAAC GAAGTGCTTG GGACATTGAA TGACGGTGCT ACAGCATCTG CTGCTCCGGC ACCTGCTGCT GCGCCTGCCG CGGCACCTGC TTCGGCACCC GCCGCTGCAC CGGCTGCAAC TGCTGGCGAA GAAGACCCGA TTGCTGCGCC TGCTGCGCGT CAACTGGCTG AAGAAAACGG CATCAACCTG GCCAGCGTCA AGGGCACTGG TAAAGACGGC CGTATCACCA AGGAAGACAT CGTTGCTGCC GTTGAAGCGA AGAAATCCGC TCCGGCCGCT GCGCCTGCTG CCAAGCCTGC TGCTGCCGCT GCTCCTGTCG TCGCCGCTGG CGATCGCACC GAGAAGCGTG TACCGATGAC TCGCGTGCGT GCAACGGTTG CCAAGCGTCT GGTCGAAGCC CAGTCGAACA TGGCGATGCT GACCACGTTC AACGAAGTCG ACATGACCGA AGTCATGGCA CTGCGTTCCA AGTACAAGGA CCTGTTCGAG AAGTCGCACA ACGGCGTACG CCTGGGCTTC ATGTCGTTCT TCGTCAAGGC TGCCACCGAG GCGCTGAAAC GCTTCCCGGC CGTCAACGCG TCGATCGACG GTTCCGATAT CGTTTACCAC GGCTATGCCG ACGTCGGTGT CGCGGTTTCC AGCGATCGCG GTCTGGTCGT ACCGGTTCTG CGTAACGCAG AGCACATGAG CCTGGCTGAA ATCGAAGGCG GCATCGCCAC CTTCGGCAAG AAAGCCCGTG ACGGTAAACT GTCCATCGAT GAGATGACCG GCGGTACGTT CACCATCACC AATGGTGGTA CTTTCGGTTC GATGATGTCG ACGCCGATCG TCAACCCGCC ACAGGCTGCA ATTCTGGGCA TGCACAACAT TCTGCAGCGT CCGATGGCAG TCAATGGTCA GGTTGTGATT CGCCCGATGA TGTATCTGGC GTTGTCCTAC GATCACCGTT TGATCGACGG CAAGGAAGCG GTAACCTTCC TCGTGACCAT CAAGAACCTG CTGGAAGATC CTGCTCGTCT GCTGCTGGAT ATCTGA
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Protein sequence | MAIEIKAPSF PESVADGTIS KWYKKEGDAV KRDEMLVDIE TDKVVLEVLA EADGVMGTIT KEEGAIVLSN EVLGTLNDGA TASAAPAPAA APAAAPASAP AAAPAATAGE EDPIAAPAAR QLAEENGINL ASVKGTGKDG RITKEDIVAA VEAKKSAPAA APAAKPAAAA APVVAAGDRT EKRVPMTRVR ATVAKRLVEA QSNMAMLTTF NEVDMTEVMA LRSKYKDLFE KSHNGVRLGF MSFFVKAATE ALKRFPAVNA SIDGSDIVYH GYADVGVAVS SDRGLVVPVL RNAEHMSLAE IEGGIATFGK KARDGKLSID EMTGGTFTIT NGGTFGSMMS TPIVNPPQAA ILGMHNILQR PMAVNGQVVI RPMMYLALSY DHRLIDGKEA VTFLVTIKNL LEDPARLLLD I
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