Gene Psyr_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1966 
Symbol 
ID3367476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2277546 
End bp2278940 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID637652311 
Productpeptidase M19, renal dipeptidase 
Protein accessionYP_235047 
Protein GI66045206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0692763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.528034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAC CGCGTTGGAA AAAAGCTCTC TTCATCGGCC TGCCGCTGGC CCTGGCCATC 
AGTGCAGGTG CGGGCTTTCT GGCCTGGAAT TACTGGTCGC CAGCAGGCTA CCCGGTCAAG
GTTATGCAAC AGGCCGACGA CCTGCAGGAG CGGATCATTT CCTTCGACAG CCACATCACC
GTGCCGATGA AATTCGGCAG CGAGGGCAAC GAAGCCGACA AGGACGGCTC GGGGCAATTC
GACCTGGTGA AAGCCGCGCG CGGACGCCTG TCCGGGGCTG CACTGACGGT ATTCGGCTGG
CCGGAGATCT GGAACGGCGA CAACGCCCCG CATCGTCCGA CACCCGGTTT CGTCGACGAA
GCACGCCATC AGCAGGAAGT GCGTTACAAA ATCATCACCG GCATGGTTCG CGACTTCCCC
AATCAGGTCG GCATCGCCTA CACCCCGGAC GACATGCGCC GCCTGCACGG CGAAGGCAAG
TTTGCGATCT TCATCAGCAT GCTCAACGCT TACCCGCTGG GCAATGACCT GAGCCTGCTG
GACCACTGGA CCGCACGCGG CATGCGCATG TTCGGTTTCA GTTATGTCGG CAATAACAGC
TGGGCCGACT CTTCACGTCC CCTGCCCTTT CTCAATGACA CGCCCGACGC ACTGGGCGGC
CTGTCGGAGA TCGGCAGGCA GGCAGTGCAA CGCCTCAACG ATCTGGGCGT GATCATCGAC
GTGTCACAGA TGTCGAGCAA GGCGCTGCAA CAGGTCAGCG AGCTGAGCCG CACGCCGATG
GTCGCCTCGC ACTCGACGCC GCGTGCGCTG GTGGACATCC CGCGCAACCT CAGCGACGAG
GAACTGCAGC TCATCAAGCG CAGCGGCGGC GTGGTACAGA TCGTGGCGTT TCCGGCCTAT
TTGAAGCCGC TGAGCCAGAA GACCCAGGAC AAGCTCAACG CGCTGCGCAA GGACTTCGAC
CTGCCGCCGT TGCCGAACCT GGCCATGGCA CTGATGCCCG GCGACCCGAT CATCACCGTC
TGGCCGGAAC AACGCTTCGG CGCCTATGCC AGCAAGCTGT ACGCGATTCT CGAGGAAGAG
CCCAAAGCCA CGGTCAAGGA CTTCGTCGAC GCCATCGATT ACACCGTCCG CAAAATCGGC
ATCGACCACG TCGGCATCAG CTCCGACTTC AATGATGGCG GCGGTGTGAA AGGCTTCAAT
GATGTCAGCG AAATCCGCAA CGTGACGGCC GAACTGATCG AGCGCGGCTA TGCCGAAGCG
GATATCACCA AGCTCTGGGG CGGCAATTTC CTGCGCGTCT GGGAGCAGGT TCAGGCTGCT
GCTCGTCCGG ATATGAAGCA CATGAATCTC TCAAACGCCG CTACCCGACC CTCAGGCGCA
GACGCTCATG ACTGA
 
Protein sequence
MTRPRWKKAL FIGLPLALAI SAGAGFLAWN YWSPAGYPVK VMQQADDLQE RIISFDSHIT 
VPMKFGSEGN EADKDGSGQF DLVKAARGRL SGAALTVFGW PEIWNGDNAP HRPTPGFVDE
ARHQQEVRYK IITGMVRDFP NQVGIAYTPD DMRRLHGEGK FAIFISMLNA YPLGNDLSLL
DHWTARGMRM FGFSYVGNNS WADSSRPLPF LNDTPDALGG LSEIGRQAVQ RLNDLGVIID
VSQMSSKALQ QVSELSRTPM VASHSTPRAL VDIPRNLSDE ELQLIKRSGG VVQIVAFPAY
LKPLSQKTQD KLNALRKDFD LPPLPNLAMA LMPGDPIITV WPEQRFGAYA SKLYAILEEE
PKATVKDFVD AIDYTVRKIG IDHVGISSDF NDGGGVKGFN DVSEIRNVTA ELIERGYAEA
DITKLWGGNF LRVWEQVQAA ARPDMKHMNL SNAATRPSGA DAHD