Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1966 |
Symbol | |
ID | 3367476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2277546 |
End bp | 2278940 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652311 |
Product | peptidase M19, renal dipeptidase |
Protein accession | YP_235047 |
Protein GI | 66045206 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0692763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.528034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAC CGCGTTGGAA AAAAGCTCTC TTCATCGGCC TGCCGCTGGC CCTGGCCATC AGTGCAGGTG CGGGCTTTCT GGCCTGGAAT TACTGGTCGC CAGCAGGCTA CCCGGTCAAG GTTATGCAAC AGGCCGACGA CCTGCAGGAG CGGATCATTT CCTTCGACAG CCACATCACC GTGCCGATGA AATTCGGCAG CGAGGGCAAC GAAGCCGACA AGGACGGCTC GGGGCAATTC GACCTGGTGA AAGCCGCGCG CGGACGCCTG TCCGGGGCTG CACTGACGGT ATTCGGCTGG CCGGAGATCT GGAACGGCGA CAACGCCCCG CATCGTCCGA CACCCGGTTT CGTCGACGAA GCACGCCATC AGCAGGAAGT GCGTTACAAA ATCATCACCG GCATGGTTCG CGACTTCCCC AATCAGGTCG GCATCGCCTA CACCCCGGAC GACATGCGCC GCCTGCACGG CGAAGGCAAG TTTGCGATCT TCATCAGCAT GCTCAACGCT TACCCGCTGG GCAATGACCT GAGCCTGCTG GACCACTGGA CCGCACGCGG CATGCGCATG TTCGGTTTCA GTTATGTCGG CAATAACAGC TGGGCCGACT CTTCACGTCC CCTGCCCTTT CTCAATGACA CGCCCGACGC ACTGGGCGGC CTGTCGGAGA TCGGCAGGCA GGCAGTGCAA CGCCTCAACG ATCTGGGCGT GATCATCGAC GTGTCACAGA TGTCGAGCAA GGCGCTGCAA CAGGTCAGCG AGCTGAGCCG CACGCCGATG GTCGCCTCGC ACTCGACGCC GCGTGCGCTG GTGGACATCC CGCGCAACCT CAGCGACGAG GAACTGCAGC TCATCAAGCG CAGCGGCGGC GTGGTACAGA TCGTGGCGTT TCCGGCCTAT TTGAAGCCGC TGAGCCAGAA GACCCAGGAC AAGCTCAACG CGCTGCGCAA GGACTTCGAC CTGCCGCCGT TGCCGAACCT GGCCATGGCA CTGATGCCCG GCGACCCGAT CATCACCGTC TGGCCGGAAC AACGCTTCGG CGCCTATGCC AGCAAGCTGT ACGCGATTCT CGAGGAAGAG CCCAAAGCCA CGGTCAAGGA CTTCGTCGAC GCCATCGATT ACACCGTCCG CAAAATCGGC ATCGACCACG TCGGCATCAG CTCCGACTTC AATGATGGCG GCGGTGTGAA AGGCTTCAAT GATGTCAGCG AAATCCGCAA CGTGACGGCC GAACTGATCG AGCGCGGCTA TGCCGAAGCG GATATCACCA AGCTCTGGGG CGGCAATTTC CTGCGCGTCT GGGAGCAGGT TCAGGCTGCT GCTCGTCCGG ATATGAAGCA CATGAATCTC TCAAACGCCG CTACCCGACC CTCAGGCGCA GACGCTCATG ACTGA
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Protein sequence | MTRPRWKKAL FIGLPLALAI SAGAGFLAWN YWSPAGYPVK VMQQADDLQE RIISFDSHIT VPMKFGSEGN EADKDGSGQF DLVKAARGRL SGAALTVFGW PEIWNGDNAP HRPTPGFVDE ARHQQEVRYK IITGMVRDFP NQVGIAYTPD DMRRLHGEGK FAIFISMLNA YPLGNDLSLL DHWTARGMRM FGFSYVGNNS WADSSRPLPF LNDTPDALGG LSEIGRQAVQ RLNDLGVIID VSQMSSKALQ QVSELSRTPM VASHSTPRAL VDIPRNLSDE ELQLIKRSGG VVQIVAFPAY LKPLSQKTQD KLNALRKDFD LPPLPNLAMA LMPGDPIITV WPEQRFGAYA SKLYAILEEE PKATVKDFVD AIDYTVRKIG IDHVGISSDF NDGGGVKGFN DVSEIRNVTA ELIERGYAEA DITKLWGGNF LRVWEQVQAA ARPDMKHMNL SNAATRPSGA DAHD
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