| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1935 |
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| Symbol | |
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| ID | 3367445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2208062 |
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| End bp | 2208556 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637652280 |
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| Product | hypothetical protein |
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| Protein accession | YP_235016 |
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| Protein GI | 66045175 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.361431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTTG ACGCATTTAT GCAGGTGGAC GGTGTAGAGG GAGAGTCTCT GGACGACGCC
CACAAAGGCT GGGTAGAACT ACTTTCCTAC CATTACGACG CAGTTCAGTC GGTCAGTACA
ACTGCCTGTT CCAGCGGCGG CGCGACTGCT GGGGGCGTGA CTCTGGGCGA CCTTAGGGTA
AGTAAATACA TAGACAAAGC AACACCCAAA CTATTTGAAC TTTGCTGCCG AGGTTCGCAT
ATCAAAAAAG TAACTATACG CGTACACCGC GCAGGCACTG AGAAATTTAA ATATTTAGAT
ATCGTTCTTG AAGAAGTGTT GATATCAACG ATTAGCGGCA ATGGCGCGGA ACATGCTGGC
CTTCCCAAAG AAACGATCAC ACTAAACTAC GGGCGTATAA AACTCGAATA CTCGCAACAG
AGGCGTACTG ATGGTGGTAG TGCAGGGATA GTGTTCGGAG GCTGGGATAG AGTCGCCAAG
AAACCTTTCG CTTAA
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| Protein sequence | MSFDAFMQVD GVEGESLDDA HKGWVELLSY HYDAVQSVST TACSSGGATA GGVTLGDLRV
SKYIDKATPK LFELCCRGSH IKKVTIRVHR AGTEKFKYLD IVLEEVLIST ISGNGAEHAG
LPKETITLNY GRIKLEYSQQ RRTDGGSAGI VFGGWDRVAK KPFA
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