Gene Psyr_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1918 
Symbol 
ID3367428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2191553 
End bp2192686 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content58% 
IMG OID637652264 
Productsensor histidine kinase 
Protein accessionYP_235000 
Protein GI66045159 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00166178 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATGC GGTTATCAGG CTTCATCCTC GACAACATCG AGCCTATCGT GCGCGAGTGG 
ACCGATTTCG CACGCACCCT GTCCGCGCTC GGCGAGCCTC TGGATACCAC GGAGCTCAGA
GACCATGCCG AGCAAATGCT GCGGGCTATC GCCGCTGATC TGCAAACGGA TCAGTCGTTG
CAGCAACAGG TCGACAAATC GCAGGGCCAC GGTGTGTCAA ATGAACAGAC CGCAGCGAAA
AGCCATGCGA TCACTCGATT GATGTCGGGC TTCACCATCG ATCAGGTGGT CTCGGAGTTT
CGGGCATTAC GGGCGAGCGT GATCAAACAG TGGATGTCGC GAGAGGCGCT GGACACTCAA
CAGCAGATCG AAGACATGAT CCGTTTCAAC GAGGCGATAG ATCAGGCCCT GGCCGAGTCT
ATCTCCAGCT ATACCAGCGC GATCCAGGCG TCACGCAACA TCTTTCTGGG CATTCTCGGG
CACGACTTGC GCACCCCGCT AAGCGCCATA CTGCTGGGTG CCGACGTGTT GTTGCGCACC
CATGATCTGG GCGCGCGGCC AACCAAGGTC GCATCGAGGA TCTATTCCAG CGTTAAGCGG
GCCAACCAGA TCGTTGGCGA CCTGCTCGAC TTCACGCGCT CACAGATCGG TCCCGGCATC
CCGCTGAAAA AGACCGAAGT AGACATGCAA CCCATCTGCG CGCGGATTGT TGAAGAGTCG
AGTACGGTCC ACCCTGAGGC AGACATTCGT CTGACTTCAG ATGAACCGGT CATTGGCCGC
TTCGATGGCG ATCGCCTGGA GCAGGTCTTT TCCAACCTCA TCGGCAACGC TATACAGCAC
GGCAATAGCA GCGATCCCGT CGAAGTGACG CTGGCCGTCT CGGAGAGCGA GCTGCGTTTT
ACCGTCCACA ACACCGGCAG CCCGATTCCC GAGGACGTGC TTCCGTTCAT CTTCAACCCG
ATGGACCGCT ATTCACCCGA AAAGATGACC GACAACGGAC CTTATTCAAG CCTGGGGCTG
GGCCTGTTCA TCGTCGACAG GATTGTCGAT GCGCACGGCG GGCATATCGA GGTGACGTCG
AAAGCGGATC TGGGGACTAC GTTTGCGGTT GTTATCCCGT TGAGTGCGGG GTGA
 
Protein sequence
MAMRLSGFIL DNIEPIVREW TDFARTLSAL GEPLDTTELR DHAEQMLRAI AADLQTDQSL 
QQQVDKSQGH GVSNEQTAAK SHAITRLMSG FTIDQVVSEF RALRASVIKQ WMSREALDTQ
QQIEDMIRFN EAIDQALAES ISSYTSAIQA SRNIFLGILG HDLRTPLSAI LLGADVLLRT
HDLGARPTKV ASRIYSSVKR ANQIVGDLLD FTRSQIGPGI PLKKTEVDMQ PICARIVEES
STVHPEADIR LTSDEPVIGR FDGDRLEQVF SNLIGNAIQH GNSSDPVEVT LAVSESELRF
TVHNTGSPIP EDVLPFIFNP MDRYSPEKMT DNGPYSSLGL GLFIVDRIVD AHGGHIEVTS
KADLGTTFAV VIPLSAG