Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1901 |
Symbol | |
ID | 3367411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2176378 |
End bp | 2177811 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652247 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_234983 |
Protein GI | 66045142 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.961651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000428846 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAGAGT GGCGCCTCGG TCTGTTTAAA GGAGTACGCA TGGCTGTCTA CAACTACGAC GTAGTGGTAC TGGGTTCCGG CCCTGCCGGA GAAGGCGCGG CAATGAACGC CGCCAAGGCG GGGCGCAAGG TCGCCATGGT CGACAGCCGT CGGCAAGTGG GCGGTAACTG CACCCATTTG GGCACCATTC CGTCCAAGGC CCTGCGTCAC TCGGTCAAGC AGATCATTCA GTTCAACACC AACCCGATGT TTCGTGCCAT CGGCGAGCCG CGCTGGTTTT CGTTTCCGGA TGTGTTGAAA AACGCCGAAA TGGTCATCTC CAAGCAAGTG GCCTCGCGCA CCAGTTACTA CGCCCGCAAC CGCGTCGACG TGTTCTTCGG CACCGGCAGT TTTGCCGACG AGACCAGCAT CAACGTGGTC TGCACCAACG GTGTGGTGGA AAAGCTGGTG GCCAACCAGA TCATCATCGC CACCGGTTCG CGCCCCTATC GGCCGGCCGA CATCGATTTC AGTCACAAGC GCATCTACGA CAGCGACACC ATCCTCAGCC TGGGCCATAC CCCGCGCAAG CTGATCATTT ATGGCGCCGG TGTGATCGGC TGTGAATACG CCTCGATCTT CAGCGGCCTT GGCGTGCTGG TCGAACTGGT GGATAACCGT GACCAGTTGC TGAGCTTCCT GGATTCGGAA ATCTCCCAGG CGCTGAGCTA TCACTTCAGC AACAACAACG TCATGGTTCG CCACAACGAA GAGTACGAGA AGGTCGAAGG CCTGGATAAC GGCGTTATCC TGCACCTGAA GTCCGGCAAG AAGATCAAGG CCGATGCCTT GCTGTGGTGC AACGGCCGTA CCGGCAACAC CGACAAGCTG GGTCTTGAGA ACATTGGTCT GAAAGCCAAC GGTCGTGGTC AGATCGAAGT GGACGAGACC TACCGCACCA GCGTTTCCAA CGTCTACGGC GCAGGCGATG TGATTGGCTG GCCAAGCCTG GCCAGTGCTG CTTACGACCA GGGTCGTTCG GCCGCGGGCA GCATGGTCGA CAATGGCAGC TGGCGTTATG TCAACGATGT GCCGACCGGG ATCTACACGA TTCCCGAGAT CAGCTCGATC GGCAAGAACG AACACGAACT GACGCAGGCC AAGGTGCCTT ACGAGGTGGG CAAGGCGTTC TTCAAGGGCA TGGCGCGCGC GCAGATTTCC GGTGAGCGGG TCGGGATGCT GAAGATCCTG TTCCACCGCG AGACGCTCGA GGTGCTGGGC GTGCATTGCT TCGGCGACCA GGCGTCCGAG ATCGTGCACA TCGGTCAGGC AATCATGAGT CAGCCGGGTG AAGCGAACAC CATGAAGTAC TTCGTCAACA CCACGTTCAA CTACCCGACC ATGGCCGAAG CCTATCGGGT AGCCGCATAC GACGGCCTCA ACCGGCTTTT TTAA
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Protein sequence | MPEWRLGLFK GVRMAVYNYD VVVLGSGPAG EGAAMNAAKA GRKVAMVDSR RQVGGNCTHL GTIPSKALRH SVKQIIQFNT NPMFRAIGEP RWFSFPDVLK NAEMVISKQV ASRTSYYARN RVDVFFGTGS FADETSINVV CTNGVVEKLV ANQIIIATGS RPYRPADIDF SHKRIYDSDT ILSLGHTPRK LIIYGAGVIG CEYASIFSGL GVLVELVDNR DQLLSFLDSE ISQALSYHFS NNNVMVRHNE EYEKVEGLDN GVILHLKSGK KIKADALLWC NGRTGNTDKL GLENIGLKAN GRGQIEVDET YRTSVSNVYG AGDVIGWPSL ASAAYDQGRS AAGSMVDNGS WRYVNDVPTG IYTIPEISSI GKNEHELTQA KVPYEVGKAF FKGMARAQIS GERVGMLKIL FHRETLEVLG VHCFGDQASE IVHIGQAIMS QPGEANTMKY FVNTTFNYPT MAEAYRVAAY DGLNRLF
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