Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1900 |
Symbol | |
ID | 3367410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2175268 |
End bp | 2176251 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652246 |
Product | ApbE-like lipoprotein |
Protein accession | YP_234982 |
Protein GI | 66045141 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0470601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0133899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCTGG TGTGCAGTGG TTGTGGTCAG GAACGCAAGC TGGAAAGCTT TGGCGGGCCG ACCATGGGCA GTCATTATTC CGTGGTGTAT GCGCGCGCTT CCGGGCAGCC GGAGCCTGCG GCTGTGCGTC CCGAGGTCGA AGCGATTCTA GACGAGGTCG ATCAGCAGAT GTCGCTCTGG CGCGCGGATT CGGATATCGA GCGCTTCAAT GCGTTGCCTG CCAATAGCTG CCAGGTGATG CCGGAACCGG TCTTGAAACT GATCGGCGTG GGCGAACAGT TGGCGCAGGA GAGCGACGGA GCCTTCGATC TGACGGTCAA GCCGTTGATG GACCTGTGGG GGTTGGGGCC TCATACGCTG TTCGAGCAGA TGCCGCTGGT GCGGCAACTG GCCCGGACTC AGGCGCTGGT CGGTTATCGC AACCTGCGCA TCGTCGGCGA CCGGTTGTGC AAGAGTGCCG CCGTGCAAGT GGACCTCAAC AGCATCGCCG CCGGCTATGC GGTCGATCGG ATCAGCGAAC GGATGGACGC GCTCGGCTTG CACGATTATC TGGTGCAGGC CACGGGTGAA CTGAAAGTCA GCGGGCTCAA GCCCGACGGC TCGCCCTGGC GGGTGACCCT GGACGCGCCG CTCGATGATG GCACTGTCAC GCAAAAAGTG TTTCCGCTGA AAGGCTACGC CGTGTCTACG TCGGGCGACT ATCGTCGCTA CGTCGACCAT GCCGGGTGGC GCATTTCCGA TACGCTCGAT GCCTTGAGCG GTAAGCCGAT CAGCCACAGT CTGGCGTCGG TGACGGTCAT TCATCCCTCG GCGCTGATGG CTGACGGTCT GTCTTCCCTG CTGTTGATTC TCGGCCCGCA GCGCGGTTGG GATTATGCGC AAGAACATAA AATCCCTGCT TTTTTTGTGA TTCGTGCCGA TAAGCGCTTT ATCATCCGCA GCAACGCGTC GTTTGATCAT CTGGTTGTGC AGCAGCCGCG CTAA
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Protein sequence | MLLVCSGCGQ ERKLESFGGP TMGSHYSVVY ARASGQPEPA AVRPEVEAIL DEVDQQMSLW RADSDIERFN ALPANSCQVM PEPVLKLIGV GEQLAQESDG AFDLTVKPLM DLWGLGPHTL FEQMPLVRQL ARTQALVGYR NLRIVGDRLC KSAAVQVDLN SIAAGYAVDR ISERMDALGL HDYLVQATGE LKVSGLKPDG SPWRVTLDAP LDDGTVTQKV FPLKGYAVST SGDYRRYVDH AGWRISDTLD ALSGKPISHS LASVTVIHPS ALMADGLSSL LLILGPQRGW DYAQEHKIPA FFVIRADKRF IIRSNASFDH LVVQQPR
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