| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1857 |
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| Symbol | |
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| ID | 3367366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2134518 |
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| End bp | 2135201 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652205 |
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| Product | HAD family 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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| Protein accession | YP_234942 |
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| Protein GI | 66045101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4229] Predicted enolase-phosphatase |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0326852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.421452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCATCA AAGCTATCCT CACGGATATC GAAGGCACCA CCAGTGCAGT GAGTTTCGTT
TTCGACGTGC TGTTTCCGTT CGCCAGAAAG CACCTGCCCG CATTCGTTCG CGAACATGCC
GAGCAACCGG CCGTGGCGCA GCAGTTGCAG GCGGTGCGCG ACCTGGCCGG TGAGCCGGAC
GCCGATGTCG AGCGCGTCAT TGCACTCCTG CTGGAATGGA TCGCCGAGGA CCGCAAAGCC
ACACCTCTCA AGGCCCTGCA GGGGATGGTC TGGGAGCAGG GTTACAACGC CGGACAGCTA
AAGGGGCATG TTTATCCGGA TGCTGTCGAT GCCTTGAAAC ACTGGCATCA ACAGGGCTAC
CGGCTTTACG TTTATTCCTC GGGCTCTATT CAGGCTCAGC AATTGATTTT CGGCTGTTCC
GAGGCGGGCG ATCTGTCCGG CCTGTTCAGC GGTTACTTCG ATACGACCTC CGGCCCCAAG
CGCGAAGCGC AGTCCTACCG GACGATTGCC CAGGCAATGG ACTGTCCTGC CGGGGACATT
CTGTTCCTGT CGGATATCGT CGAAGAACTC GATGCCGCAC AGGCCGCCGG CATGGCCACC
TGCGGTCTTG CGCGTGATGG CGGGGCACTT GCCGGGCACC GGTATGTGAC CAGTTTTGCG
CTTATCGACC CAGCCTCTTT CTAG
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| Protein sequence | MPIKAILTDI EGTTSAVSFV FDVLFPFARK HLPAFVREHA EQPAVAQQLQ AVRDLAGEPD
ADVERVIALL LEWIAEDRKA TPLKALQGMV WEQGYNAGQL KGHVYPDAVD ALKHWHQQGY
RLYVYSSGSI QAQQLIFGCS EAGDLSGLFS GYFDTTSGPK REAQSYRTIA QAMDCPAGDI
LFLSDIVEEL DAAQAAGMAT CGLARDGGAL AGHRYVTSFA LIDPASF
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