Gene Psyr_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1811 
Symbol 
ID3367319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2083963 
End bp2084712 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID637652159 
Producttranscriptional regulator GntR 
Protein accessionYP_234896 
Protein GI66045055 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC AGTCCCTGCC TCTCAAGAAA CAGCCGCGCA GCCTAGGTTC AAGCCGTAAC 
GTCACGCAGG ACGATGTCGT TTACGAGCAT GTTTTCGATG CCATTCTGGA ACAGCGGCTG
GCGCCGGGCA CCAAACTGAG TGAAGAGGCG CTGGGCGAGA TTTTCGGTGT CAGCCGCACC
ATCATTCGTC GCGCCCTGTC GCGGTTGGGC CATGAGGGCG TCGTGCTGTT GCGCCCCAAC
CGTGGCGCGG TGGTCGCCAG CCCCAGCGTC GAAGAGGCGC GTCAGGTGTT TTTCGCGCGG
CGCATGGTCG AGAAGGCAAT CACTGAACTG GCGGTCGAGC ACGCCACTGC CGAGCAACTG
GCCGAGCTGC GCCAGATGGT CAGCGACGAG CGCGACAGCT TCGCTCGCGG TGATCGGGGC
GCCGGTATTC GTTTGTCCGG CGAGTTTCAC CTCCAGTTGG CCGTGGCCGC GAGAAACGCG
CCGCTGATCA GCTTCCAGCG CAGCCTGGTG TCGCAGACCT CACTGATCAT TGCCCAGTAC
GAAACCGGCA ATCGCACGCA TTGTTCCTAC GATGAGCACA ACCAGTTGAT CGACGCCATC
GAAGCCCGCA ATGCAGCGCT GGCCGTCGAA CTGATGATGC ATCACATGGA CCACATCGAC
AGCAAGCTCA ACCTTGACGA AGACAGCGCC TCGGATGATT TGCATGCGGT GTTCTCGCAC
GTCATGGGCC GGAAAAAGCC GGTGCGTTGA
 
Protein sequence
MNDQSLPLKK QPRSLGSSRN VTQDDVVYEH VFDAILEQRL APGTKLSEEA LGEIFGVSRT 
IIRRALSRLG HEGVVLLRPN RGAVVASPSV EEARQVFFAR RMVEKAITEL AVEHATAEQL
AELRQMVSDE RDSFARGDRG AGIRLSGEFH LQLAVAARNA PLISFQRSLV SQTSLIIAQY
ETGNRTHCSY DEHNQLIDAI EARNAALAVE LMMHHMDHID SKLNLDEDSA SDDLHAVFSH
VMGRKKPVR