| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1788 |
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| Symbol | |
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| ID | 3367296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2039528 |
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| End bp | 2040727 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637652136 |
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| Product | major facilitator transporter |
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| Protein accession | YP_234873 |
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| Protein GI | 66045032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0140849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCGCT TTGAAACCGC TGGAAACGTA CAAACAAAAC CCGCTTCATG GTGGGCCGTT
GGCAGCGTAT CGCTTGGGTC GTTCGCCACC GTCACCACTG AATTTCTGCC GGTCGGGCTG
CTGCCCGATA TCGCTCGCGA CCTGGGAACC AGCATCAGCC AGACAGGCTT GATGATGGCC
GTCCCTGGCA TCCTCGCGGC CATCTCGGCG CCGTCCTGTA TTGCCCTGTT CAGTCATGTC
GACCGCAAGC GCCTGCTGCT CGGGCTGCTG TCGATATTGC TGGCCTCCAA CCTGATCGTC
GCGTTGTCCA CGCACTTCTG GCTGACCCTG GCGGGCAGGG TCCTGCTCGG CTTCGCGCTG
GGGGGATTCT GGACGATTGC CGGGTCGCTC GGGCCACGCT TGAGGCCCGG CAAGGAGGGC
GTCAAGGCCA CCGCGTATGT GCTGGCGGGC GTCTCGATCG GCACTGTCGC CGGGATTCCG
GCCGGCACGT TGATCGGTGA AGCCTTCGGC TGGCGTGCTG CGTTTGAAAC AGCGGCAGTG
GTCACGGTTG CCGTGGGGGT GTTGATTGCA ACCTTCCTGC CTGCGTTGCC GGGCGAGCGC
TCTGCCGGCA TCAGCCAGAT GTTGTCGCTG GCTGGCGAGC AGCGCATTCG TCGCATGTTC
GCTGCCGCAC TGTTGATCTA TGTCGGGCAC TTCGCGGCTT ACACGTACCT CGCGCCCTTC
GTGCAGGAAT TCGCGCATAT TCAGGGTCAG GCCCTGGGCG CATTGCTCTT CGCCTTCGGC
CTGGCGGCTG TTGCAGGCAA CCTGGCCGGT GGAGCTCTGG CGGCCAGGAG CGCACCGTCC
TCGGTGCTGA TCATGACCCT GCTGATGCTG GGTTCGCTGA CCGCGCTGCT GATGTTCGTC
GGTAACCCGT GGCTGCTCTG GCCGGTGATT CTGGTCTGGG GGTTCGCGTT CGGGATGATC
CCCATCACCA CGCAGATCTG GTGCTTCGAG GCTTCAAACG ATCGTGTGGA AGGCGTTCAG
GCGCTGCTGG TCTGTGTGGT GAATCTGTCG ATTGGCGGCG GGGCGTTCAT TGGCGGTGCG
GTGTCCGCTC GGGCCGGCTT TACCGCTGCC ATCGTGATCG GTGCGGTATG TGCTGCGCTG
TCCATGCTCA CCGTGATGCT GGCGATGCGC AACTCAAAGC CGGTCAGTTG CACCGACTGA
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| Protein sequence | MSRFETAGNV QTKPASWWAV GSVSLGSFAT VTTEFLPVGL LPDIARDLGT SISQTGLMMA
VPGILAAISA PSCIALFSHV DRKRLLLGLL SILLASNLIV ALSTHFWLTL AGRVLLGFAL
GGFWTIAGSL GPRLRPGKEG VKATAYVLAG VSIGTVAGIP AGTLIGEAFG WRAAFETAAV
VTVAVGVLIA TFLPALPGER SAGISQMLSL AGEQRIRRMF AAALLIYVGH FAAYTYLAPF
VQEFAHIQGQ ALGALLFAFG LAAVAGNLAG GALAARSAPS SVLIMTLLML GSLTALLMFV
GNPWLLWPVI LVWGFAFGMI PITTQIWCFE ASNDRVEGVQ ALLVCVVNLS IGGGAFIGGA
VSARAGFTAA IVIGAVCAAL SMLTVMLAMR NSKPVSCTD
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