Gene Psyr_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1769 
Symbol 
ID3367277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2013029 
End bp2014180 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID637652118 
ProductAcyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal 
Protein accessionYP_234855 
Protein GI66045014 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACC TTGAATTGAG TGAAGAGCAG GTAATGATTC GCGACATGGC GCGCGACTTT 
GCGCGTAATG AAATCGCGCC GTATGCCCAG GCCTGGGAAA AGGCCGGCTG GATCGATGAC
GCACTGGTTG CCAAGCTCGG CGAACTGGGC CTGCTGGGCA TGGTGGTGCC GGAGCAATGG
GGTGGCACCT ACATCGATTA CGTCGCCTAC GCCCTGGCGG TTGAGGAAAT CTCCGCTGCC
GACGCGGCCA CCGGCACATT GATGAGCGTT CACAGCTCGG TGGGCTGCGG GCCGGTTCTC
AACTACGGCA CCGACGAGCA GAAACATGCC TGGCTGGAAA AACTGGCCAC GGGCCGGGCC
ATCGGCTGTT TCTGCCTGAC CGAACCACAT GCAGGCTCTG AAGCCCACAA CCTGCGGACT
CGTGCCGAGT TACAGGGCGA TGAGTGGGTG ATCAACGGCG CCAAGCAGTT CGTCAGCAAC
GGCAAGCGGG CACAACTGGC TATCGTGTTT GCGGTGACCG ATCCGGCGCT TGGCAAAAAG
GGCCTGTCAG CCTTTCTGGT GCCGACCGAA AACCCCGGTT TCGTGGTGGA TCGCAGCGAA
CACAAGATGG GCATCCGCGC ATCGGACACC TGCGCGGTCA CCTTGAACAA CTGCCGCATC
CCGGCTGCCA ACCTGCTGGG TGAGCGCGGC AAGGGCCTGT CGATCGCCCT CTCCAACCTG
GAAGGCGGCC GCATCGGCAT CGCCGCGCAG GCGCTGGGTA TCGCCCGCGC CGCCTTCGAA
GCTGCGCTGG CGTATGCGCG GGAACGTGTG CAGTTCGACA AACCGATCAT CGAACATCAA
AGCATTGCCA ATCTGCTGGC CGACATGCAC ACCCGCATCA ATGCCGCCCG CCTGCTGACC
CTGCACGCCG CGCGGCTGCG CAGCGCCGGG CAAGCGTGCC TGTCGGAAGC CTCTCAAGCC
AAGCTGTTCG CGTCGGAAAT GGCCGAATGG GTGTGCTCCA AGGCGATCCA GATTCATGGT
GGCTATGGCT ATCTGGAGGA CTACCCGGTC GAGCGTTACT ACCGGGACGC GCGCATCACC
CAGATATACG AAGGCTCCAG CGAGATCCAG CGCCTGTTGA TCGCCCGTGA ATTGCGCCAT
TATCTGGTCT GA
 
Protein sequence
MHDLELSEEQ VMIRDMARDF ARNEIAPYAQ AWEKAGWIDD ALVAKLGELG LLGMVVPEQW 
GGTYIDYVAY ALAVEEISAA DAATGTLMSV HSSVGCGPVL NYGTDEQKHA WLEKLATGRA
IGCFCLTEPH AGSEAHNLRT RAELQGDEWV INGAKQFVSN GKRAQLAIVF AVTDPALGKK
GLSAFLVPTE NPGFVVDRSE HKMGIRASDT CAVTLNNCRI PAANLLGERG KGLSIALSNL
EGGRIGIAAQ ALGIARAAFE AALAYARERV QFDKPIIEHQ SIANLLADMH TRINAARLLT
LHAARLRSAG QACLSEASQA KLFASEMAEW VCSKAIQIHG GYGYLEDYPV ERYYRDARIT
QIYEGSSEIQ RLLIARELRH YLV