Gene Psyr_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1764 
Symbol 
ID3367272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2005215 
End bp2005994 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637652113 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_234850 
Protein GI66045009 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.743789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.953507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC AAAACCTGGA TAACAGATCG ATCGTCCTCG ATACCGAAAC CACCGGTATG 
CCGGTGACGG ATGGTCACCG CATCATCGAG ATCGGTTGTG TCGAGTTGAT CGGTCGTCGC
CTGACCGGGC GGCATTTTCA CGTTTACCTG CAACCTGATC GCGAAAGTGA CGAAGGCGCG
ATCGGTGTTC ACGGTATCAC CAACGAATTT CTGGTCGGCA AGCCGCGGTT TGCCGAAGTC
GCCGATGAAT TCTTCGAGTT CATCAAGGGC GCGCAGCTGA TCATTCACAA CGCAGCGTTC
GACGTTGGCT TCATCAACAA CGAATTTGCC TTGATGGGTT CGCAGGACAG GGCTGATATC
ACCCAGCACT GTTCGATTCT CGATACCCTG ATGATGGCGC GAGAGCGCCA CCCGGGTCAG
CGCAACAGCC TGGATGCACT GTGCAAGCGC TATGGCGTCG ACAACTCGGG CCGTGAGTTG
CACGGCGCAT TGCTCGACTC CGAGATTCTG GCTGACGTCT ACCTGGCGAT GACCGGCGGG
CAGACCAGCC TGTCGCTGGC CGGCAATGCT TCCGATGGCA ATGGTTCGGG CGAAGGCTCC
GGCAACCGTG GCAGCGAAAT TCGCCGCCTG CCGGCCGATC GCAAGCCTTG CCGCATCATT
CGCGCTTCTG AAAGTGAACT GGCCGAGCAC GAAGTGCGTA TGAGCACCAT CGCCAAGGCT
TGCGGTGCTC CTCCGCTCTG GGTACAGATG CTGGAAGCCG GAGCACCGGC ATCTTCCTGA
 
Protein sequence
MALQNLDNRS IVLDTETTGM PVTDGHRIIE IGCVELIGRR LTGRHFHVYL QPDRESDEGA 
IGVHGITNEF LVGKPRFAEV ADEFFEFIKG AQLIIHNAAF DVGFINNEFA LMGSQDRADI
TQHCSILDTL MMARERHPGQ RNSLDALCKR YGVDNSGREL HGALLDSEIL ADVYLAMTGG
QTSLSLAGNA SDGNGSGEGS GNRGSEIRRL PADRKPCRII RASESELAEH EVRMSTIAKA
CGAPPLWVQM LEAGAPASS