Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1764 |
Symbol | |
ID | 3367272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2005215 |
End bp | 2005994 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652113 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_234850 |
Protein GI | 66045009 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.743789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.953507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC AAAACCTGGA TAACAGATCG ATCGTCCTCG ATACCGAAAC CACCGGTATG CCGGTGACGG ATGGTCACCG CATCATCGAG ATCGGTTGTG TCGAGTTGAT CGGTCGTCGC CTGACCGGGC GGCATTTTCA CGTTTACCTG CAACCTGATC GCGAAAGTGA CGAAGGCGCG ATCGGTGTTC ACGGTATCAC CAACGAATTT CTGGTCGGCA AGCCGCGGTT TGCCGAAGTC GCCGATGAAT TCTTCGAGTT CATCAAGGGC GCGCAGCTGA TCATTCACAA CGCAGCGTTC GACGTTGGCT TCATCAACAA CGAATTTGCC TTGATGGGTT CGCAGGACAG GGCTGATATC ACCCAGCACT GTTCGATTCT CGATACCCTG ATGATGGCGC GAGAGCGCCA CCCGGGTCAG CGCAACAGCC TGGATGCACT GTGCAAGCGC TATGGCGTCG ACAACTCGGG CCGTGAGTTG CACGGCGCAT TGCTCGACTC CGAGATTCTG GCTGACGTCT ACCTGGCGAT GACCGGCGGG CAGACCAGCC TGTCGCTGGC CGGCAATGCT TCCGATGGCA ATGGTTCGGG CGAAGGCTCC GGCAACCGTG GCAGCGAAAT TCGCCGCCTG CCGGCCGATC GCAAGCCTTG CCGCATCATT CGCGCTTCTG AAAGTGAACT GGCCGAGCAC GAAGTGCGTA TGAGCACCAT CGCCAAGGCT TGCGGTGCTC CTCCGCTCTG GGTACAGATG CTGGAAGCCG GAGCACCGGC ATCTTCCTGA
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Protein sequence | MALQNLDNRS IVLDTETTGM PVTDGHRIIE IGCVELIGRR LTGRHFHVYL QPDRESDEGA IGVHGITNEF LVGKPRFAEV ADEFFEFIKG AQLIIHNAAF DVGFINNEFA LMGSQDRADI TQHCSILDTL MMARERHPGQ RNSLDALCKR YGVDNSGREL HGALLDSEIL ADVYLAMTGG QTSLSLAGNA SDGNGSGEGS GNRGSEIRRL PADRKPCRII RASESELAEH EVRMSTIAKA CGAPPLWVQM LEAGAPASS
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