Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1751 |
Symbol | |
ID | 3367259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1990043 |
End bp | 1991926 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637652100 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_234837 |
Protein GI | 66044996 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.348109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0677044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA ATATCAGGGA CAATTCACAA GGCTGGATTG CCAAGACAAT TATCGGACTC ATCATCGCCT TGATGGCCTT CACCGGCATC GAAGCGATGT TTACCGCTAC CAGCAACAAA CAGAACGCAG CTGAAGTCAA CGGCGAGGAC ATCTCTCAGA ATGAGTTGAG CCAGGCCGTG GACATGCAGC GCCGTCAGTT GGCTCAACAG CTCTCGCAAC AGCTGGGCAA GGATTTCGAT CCGGCCATGC TGGATGAGAA ACTGTTGCGC GAATCAGCCC TCAAAGGCCT GATCGACCGC AAGCTGCTGC TGCAAGGCGC GGCGGATGCC AGGTTCTCGT TTTCCGACGC GGCACTGGAT CAGCAGCTTT TGCAGACGCC TGAGTTTCAG GTGGATGGCA AATTCAACGC AGACCGTTTC GATCAGGTGA TTCGCCAGCT AGGCTACAGC CGTCTGCAGT TCCGCCAGAT GCTGGGTCAG GAAATGCTCA TCGGTCAGGT GCGTGCTGGT GTTGCCGGCA GCGCCTTTGT AACCGACGCA CAGGTTGAAG CCTTTGCACG CCTCGAAAAG CAGACCCGTG ATTTCGCTTC GCTGACCCTG CCTGCCGATA CCTCGGCGGT CAAAGTGACC GATGACGAAG TCAAGGCTCA CTACGACGAG CATGCCAAGG AGTTCATGAG CCCTGAGCAG GTCGTACTCG ACTACATCGA ATTGAAGAAG TCGTCCTTCT TCGACAAGGT GCAGGTCAAG GACGAGGACT TGCAGGCGGC TTATCAGAAG GAAATCGCCA ATCTGTCCGA ACAGCGTCGT GCGGCACACA TCCTGATCGA AGTGAACGAC AAGCTGAATG ACGAGCAGGC CAAGGCGAAG ATTGAAGAAA TTCAGCAGCG TCTGGCCAAG GGTGAGGATT TCGCGGCACT GGCCAAGGAA TACTCGCAGG ACCCTGGTTC GTCGAACAAG GGCGGTGATC TGGGCTACGC AGGCAAGGGT GTCTATGACC CGGCTTTCGA AGAGGCGCTG TATGCCTTGA ACAAGGACCA GGTTTCGCAG CCGGTGCGCA CCGACTTCGG CTGGCACCTG ATCAAGCTGC TGGGCGTTGA AGCACCTTCG GTGCCGAGCT TTGCCAGTCT GAAAGGCAAG CTGACCAACG ATTTGAAATC GCAGCTGGTC GAGCAGAAGT TTGTCGAAGT GACCAAGCAA CTGGAAGACT CGGCGTTCGA ATCGTCCGAC CTGTCCCAGC CGGCACAGGA CCTGGGCCTG AAGGTTCAGA CCACTGCACC GTTCGGTCGT GAAGGCGGCG AAGGCCTGAC GGCCAACCGT GCGGTCATCC AGGCGGCATT CAGCCCTGAA GTGTTGGAAG AGGGCGCCAA CAGCAATACG CTGGAGCTGG ATCCGGAAAC CGTTGTGGTG GTGCGCTCCA AAGAGCACCT GCAGCCGCAG CAGTTGCCAC TTGAGAGCGT TGCCAGCTCG ATTCGCGCTC AACTGGTCAA GGAACATGCT TCGGCCGCTG CCAAGGCCAA GGGCGAGGCG CTGCTGGCCG GTCTGCGTGA CGGCAAGATC CCGTTGGCTG CCAAGCAGGA AGGTCGTGAC TGGAAGGTGA TGGAAGCGGT CACGCGCAGT CAGGAAGGGG TTGACCCTCA AGTGCTGCAG ACGCTGTTCC GCATGCCCAA GCCGACAGGT AAGGACAAGC CGGAATTCGC CAGCATCACT GCTTCGGATG GCAGCTTCGT GATCGTCCGT CTCAATGGCG TCAATCAGGC GGCTGCACCG ACTGACGCCG AGAAGGCGCA ATACCGTCGC TTCCTCTCCT CCCGCGAGGG GCAACAGGAT TTCGCGGCGT ACCGTGCACA GTTGGAAAGC AAGGCGAAGA TCGAGAAGTT CTAA
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Protein sequence | MLQNIRDNSQ GWIAKTIIGL IIALMAFTGI EAMFTATSNK QNAAEVNGED ISQNELSQAV DMQRRQLAQQ LSQQLGKDFD PAMLDEKLLR ESALKGLIDR KLLLQGAADA RFSFSDAALD QQLLQTPEFQ VDGKFNADRF DQVIRQLGYS RLQFRQMLGQ EMLIGQVRAG VAGSAFVTDA QVEAFARLEK QTRDFASLTL PADTSAVKVT DDEVKAHYDE HAKEFMSPEQ VVLDYIELKK SSFFDKVQVK DEDLQAAYQK EIANLSEQRR AAHILIEVND KLNDEQAKAK IEEIQQRLAK GEDFAALAKE YSQDPGSSNK GGDLGYAGKG VYDPAFEEAL YALNKDQVSQ PVRTDFGWHL IKLLGVEAPS VPSFASLKGK LTNDLKSQLV EQKFVEVTKQ LEDSAFESSD LSQPAQDLGL KVQTTAPFGR EGGEGLTANR AVIQAAFSPE VLEEGANSNT LELDPETVVV VRSKEHLQPQ QLPLESVASS IRAQLVKEHA SAAAKAKGEA LLAGLRDGKI PLAAKQEGRD WKVMEAVTRS QEGVDPQVLQ TLFRMPKPTG KDKPEFASIT ASDGSFVIVR LNGVNQAAAP TDAEKAQYRR FLSSREGQQD FAAYRAQLES KAKIEKF
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