| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1732 |
|---|
| Symbol | |
|---|
| ID | 3367237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1967309 |
|---|
| End bp | 1968055 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637652078 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | YP_234818 |
|---|
| Protein GI | 66044977 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0404119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACTGC TGATCTCCGA TCTGCATCTT GAACAGGAGC GCCCGGACAT TACCCGGGCG
TTTCTGGATC TGCTCGCAGG ACGCGCTCGC GAAGCCGAGT CGCTGTATAT CCTCGGGGAT
TTCTTTGAAG TCTGGATCGG TGACGACGCG ATGTCGCCGT TCCAGCTTTC GATCTGCAAG
GCCCTGCGCG AATTGAGCGA CAGCGGCACA CGAATTTTTC TGATGCACGG CAACCGTGAT
TTCATGCTCG GCAAGGGCTT CTGCAAGGCA GCGGGCTGCA CGCTGCTGAG CGACCCGAGC
GTTGTGCAAC TGAACGGTGA GCCGGTGCTG CTGATGCACG GCGACAGTCT GTGCACCCGC
GATGAAGGCT ATATCCGGAT GCGTCGCTAT CTGCGCCATC CGCTGACGCT GTTTATTTTG
CGCCATTTGC CGCTGGGCAC TCGGCACAAG TTGGCGCGCA AGTTGCGTAA TGAGAGCCGT
GCGCAAACCC GTATGAAGGC CAATGATATT GTCGATGTGA CGCCGGACGA GGTGCCGCGA
ATCATGCAGC AGTTCGGTGT GCGTACGTTG GTCCACGGCC ACACTCATCG TCCGGCTATT
CATAAATTGC AGATTGGCGA TCAGGCGGCC AGGCGCATTG TGCTGGGTGA CTGGGATCGT
CAGGGCTGGG TGTTGCAGGT GGATGAGCAG GGTTTCAATC TGAGTTCGTT CGACTTTGTG
CCCGAGACGG TTGCGCTGTT GAATTGA
|
|---|
| Protein sequence | MILLISDLHL EQERPDITRA FLDLLAGRAR EAESLYILGD FFEVWIGDDA MSPFQLSICK
ALRELSDSGT RIFLMHGNRD FMLGKGFCKA AGCTLLSDPS VVQLNGEPVL LMHGDSLCTR
DEGYIRMRRY LRHPLTLFIL RHLPLGTRHK LARKLRNESR AQTRMKANDI VDVTPDEVPR
IMQQFGVRTL VHGHTHRPAI HKLQIGDQAA RRIVLGDWDR QGWVLQVDEQ GFNLSSFDFV
PETVALLN
|
|---|
| |