Gene Psyr_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1700 
Symbol 
ID3367205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1907992 
End bp1909101 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID637652046 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_234786 
Protein GI66044945 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.601286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.606865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGTC CGGCACCCGC ACTCGATAAC AGCCACCTGA TAATAATAAG AGCGGAAAAG 
TCCATGCGTG AGTCTTTCCA TCGTCGCACC CGGTTATACG CGGGCATGTC CCTGGCTGTC
GTTACGTCAT CCCTGTTTGC GCTGCCAGCC ATGGCCGGTT CCGAGGCGCT AGCCACTGCC
GTTGCTGCAG ACGCTCCTGT TTATGCCATC GAGTCGGCCA AAGCCTCTCG CGCGTTGTTG
CTGGACGTTG CCCATGCGGG TGCGCGGCTG GTCGTGGTGG GTGACCATGG GCATATTCTG
CTTTCCGATG ATCAGGGCAT GACCTGGAGT CAGGCCCGCG TGCCTACCCG GCAGTTGTTG
ACGGCCGTGT TTTTTGTGGA TGAACAGCAC GGTTGGGCGG TCGGTCACGA CGCGCAGGTA
CTGGCCAGCA GCGATGGCGG CAAGAGCTGG AACAAGCAGT TCGAGGACTT GAAGCGCGAG
GCTCCGCTGC TGGATGTCTG GTTCAAGGAC CTCGACAACG GCTTGGCCAT CGGTGCCTAC
GGCCTGCTGC TGAGCACGGC TGATGGCGGG CAGCACTGGG AAGATGTCAG CGACCGGCTG
GACAACGAGG ATCAATACCA CCTGAACGGC ATTGCTCAGG TCAAGGATGC CGGCCTGTTC
ATTGTCGGCG AAGCGGGCAG CATGTTTCGC TCCCGCGACG AGGGGCAGAC CTGGGAGAAA
ATCGACGGCC CGTATCAAGG CTCGTTATTC GGCGTGATCG GCACGGCTCA GCCGTCCACG
TTGCTGGCCT ATGGTCTGCG CGGCAATCTG TTTCGCTCCA GCGATTTTGG TGACAGCTGG
CAGCCGATCG AACTGAAGGG CGCGCGAGGG CCGCTCGAGT TCGGCCTGGC CAGCGCTACG
CTGCTGGCCA ATGGCTCGCT GGTGCTGGTC GGCAATGGCG GCAGTGTCAT GCGCAGCACC
GATGACGGGG AAACATTCGC GGTCTTCAAT CGACCTGATC GCATCTCGCT GGCCGGGGTT
ACCGGCAATT CTCAGGGCAA TCTGATTCTG GTAGGACAGG GCGGCGTTCG CCTCACCTCG
TCGACGGGCG CCGATACGAC CCAACAATAA
 
Protein sequence
MSCPAPALDN SHLIIIRAEK SMRESFHRRT RLYAGMSLAV VTSSLFALPA MAGSEALATA 
VAADAPVYAI ESAKASRALL LDVAHAGARL VVVGDHGHIL LSDDQGMTWS QARVPTRQLL
TAVFFVDEQH GWAVGHDAQV LASSDGGKSW NKQFEDLKRE APLLDVWFKD LDNGLAIGAY
GLLLSTADGG QHWEDVSDRL DNEDQYHLNG IAQVKDAGLF IVGEAGSMFR SRDEGQTWEK
IDGPYQGSLF GVIGTAQPST LLAYGLRGNL FRSSDFGDSW QPIELKGARG PLEFGLASAT
LLANGSLVLV GNGGSVMRST DDGETFAVFN RPDRISLAGV TGNSQGNLIL VGQGGVRLTS
STGADTTQQ