Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1700 |
Symbol | |
ID | 3367205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1907992 |
End bp | 1909101 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652046 |
Product | BNR repeat-containing glycosyl hydrolase |
Protein accession | YP_234786 |
Protein GI | 66044945 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.601286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.606865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGTC CGGCACCCGC ACTCGATAAC AGCCACCTGA TAATAATAAG AGCGGAAAAG TCCATGCGTG AGTCTTTCCA TCGTCGCACC CGGTTATACG CGGGCATGTC CCTGGCTGTC GTTACGTCAT CCCTGTTTGC GCTGCCAGCC ATGGCCGGTT CCGAGGCGCT AGCCACTGCC GTTGCTGCAG ACGCTCCTGT TTATGCCATC GAGTCGGCCA AAGCCTCTCG CGCGTTGTTG CTGGACGTTG CCCATGCGGG TGCGCGGCTG GTCGTGGTGG GTGACCATGG GCATATTCTG CTTTCCGATG ATCAGGGCAT GACCTGGAGT CAGGCCCGCG TGCCTACCCG GCAGTTGTTG ACGGCCGTGT TTTTTGTGGA TGAACAGCAC GGTTGGGCGG TCGGTCACGA CGCGCAGGTA CTGGCCAGCA GCGATGGCGG CAAGAGCTGG AACAAGCAGT TCGAGGACTT GAAGCGCGAG GCTCCGCTGC TGGATGTCTG GTTCAAGGAC CTCGACAACG GCTTGGCCAT CGGTGCCTAC GGCCTGCTGC TGAGCACGGC TGATGGCGGG CAGCACTGGG AAGATGTCAG CGACCGGCTG GACAACGAGG ATCAATACCA CCTGAACGGC ATTGCTCAGG TCAAGGATGC CGGCCTGTTC ATTGTCGGCG AAGCGGGCAG CATGTTTCGC TCCCGCGACG AGGGGCAGAC CTGGGAGAAA ATCGACGGCC CGTATCAAGG CTCGTTATTC GGCGTGATCG GCACGGCTCA GCCGTCCACG TTGCTGGCCT ATGGTCTGCG CGGCAATCTG TTTCGCTCCA GCGATTTTGG TGACAGCTGG CAGCCGATCG AACTGAAGGG CGCGCGAGGG CCGCTCGAGT TCGGCCTGGC CAGCGCTACG CTGCTGGCCA ATGGCTCGCT GGTGCTGGTC GGCAATGGCG GCAGTGTCAT GCGCAGCACC GATGACGGGG AAACATTCGC GGTCTTCAAT CGACCTGATC GCATCTCGCT GGCCGGGGTT ACCGGCAATT CTCAGGGCAA TCTGATTCTG GTAGGACAGG GCGGCGTTCG CCTCACCTCG TCGACGGGCG CCGATACGAC CCAACAATAA
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Protein sequence | MSCPAPALDN SHLIIIRAEK SMRESFHRRT RLYAGMSLAV VTSSLFALPA MAGSEALATA VAADAPVYAI ESAKASRALL LDVAHAGARL VVVGDHGHIL LSDDQGMTWS QARVPTRQLL TAVFFVDEQH GWAVGHDAQV LASSDGGKSW NKQFEDLKRE APLLDVWFKD LDNGLAIGAY GLLLSTADGG QHWEDVSDRL DNEDQYHLNG IAQVKDAGLF IVGEAGSMFR SRDEGQTWEK IDGPYQGSLF GVIGTAQPST LLAYGLRGNL FRSSDFGDSW QPIELKGARG PLEFGLASAT LLANGSLVLV GNGGSVMRST DDGETFAVFN RPDRISLAGV TGNSQGNLIL VGQGGVRLTS STGADTTQQ
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