| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1687 |
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| Symbol | |
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| ID | 3367192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1895737 |
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| End bp | 1896609 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652033 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_234773 |
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| Protein GI | 66044932 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.205514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.563357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCTG TAGCTGTCCT GCGTTTGCCG CTGACCACCG ACCTGAGCGG TTTTGTCAGG
CTGTTGCTGC GCTTGCAGAT TCCTCACCGG GTCAGTGAAG AGGCTGGCGA GCAAGTCCTG
TGGGTGCCGG ACGCGCCGCG ACTGGTCGAA GAAGTGCGCG AGTTGTACAC GCGCTTTCCC
GAAGGCGACG AGCACGTTCA ACTGGCGCAG GACAGCGGAA GCGCCACCTA CAAGCCGCCC
GGCCTTATCG AGCAGTTACG CAGCAGTCCG GTGACGGCCC TGGTGTTGCT GGTCACCTTG
CTGGTGGCGG GGCTGACGCT GCTGGGCGAT AACCTCGAAG CCGTCCGCTG GCTGACCTTT
CAGGATTTCC GCATCAATGG CGAGTACGCA ACGTTTCTGC CGTTGTCCGA AAACCTGGCG
TCCGGGCAGT GGTGGCGGAT CATCTCGCCC ATGCTGATCC ACTTCGGCAT CCTGCACCTG
GCCATGAACG GCATGTGGTT CTGGGAGCTG GGGCGGCGGA TTGAAATTCG TCAGGGCAGC
CTGTCGCTGC TGTTGCTGAC CTTGCTGTTC TCGTCGGTTT CAAATTACGT GCAATACCTG
TTCAGCGGCC CAAGCCTGTT TGGCGGACTG TCCGGGGTGC TGTATGGCCT GCTAGGGCAT
TGCTGGATTT TCCAGATGCT GGCACCCAAC CCGGTCTACC GCCTGCCGCG CGGCGTGTTG
ATCATGATGC TGGTCTGGCT GGCGCTGTGC CTGTCCGGTC TGGTGAGCAT GCTCGGCTTC
GGCGAAATCG CCAACGGTGC GCATGTCGGC GGGCTGATCA TCGGTTGTGT CACCGGGCTG
CTGGGTGGTG CGATTGCGCG CCGCAAGGCC TAG
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| Protein sequence | MSPVAVLRLP LTTDLSGFVR LLLRLQIPHR VSEEAGEQVL WVPDAPRLVE EVRELYTRFP
EGDEHVQLAQ DSGSATYKPP GLIEQLRSSP VTALVLLVTL LVAGLTLLGD NLEAVRWLTF
QDFRINGEYA TFLPLSENLA SGQWWRIISP MLIHFGILHL AMNGMWFWEL GRRIEIRQGS
LSLLLLTLLF SSVSNYVQYL FSGPSLFGGL SGVLYGLLGH CWIFQMLAPN PVYRLPRGVL
IMMLVWLALC LSGLVSMLGF GEIANGAHVG GLIIGCVTGL LGGAIARRKA
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