Gene Psyr_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1653 
Symbol 
ID3367155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1857645 
End bp1858631 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID637651996 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_234739 
Protein GI66044898 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0730579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.338127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAG CCTACCCCTG GCAGGCTTCG CTCTGGCAGC AGATGGCCGG TCGCGCCCAG 
CACGCTCACG CCTATCTGCT GCACGGGCCG GCGGGTATCG GCAAGCGCGC TCTGGCTGAA
CGACTGATGG CCAGCCTGTT GTGCAAGACC CCTGAAGGGC TTGATGCCTG TGGACACTGC
AAGTCCTGTC TGCTGCTGGC GGCTGGCAGC CACCCTGACA ACTACGTGCT CGAGCCGGAA
GAGGCGGACA AGCCGATCAA GGTCGATCAG GTGCGTGATC TGGTCAGTTT TGTAGTGCAG
ACCGCTCAGA TGGGCGGGCG CAAGGTGGTG CTCGTCGAGC CTGTGGAAGC GATGAATACC
AACGCGGCCA ATGCCTTGCT GAAAAGTCTG GAAGAGCCTT CAGGCAATAC CGTTCTGTTG
CTGGTCAGTC ATCAACCGAG CCGCTTGCTG CCGACGGTCA AGAGCCGTTG TGTGCAGCAG
GCGTGCCCGT TGCCCGGCGA ACAGATGAGC CTCGACTGGC TGAGCGGCGC ATTGCCCGAT
TGCACGCAGG ACGAACGCTT CGAGTTGCTG ACGCTGGCCG CCGGATCGCC GCTGGCTGCG
GTGGCGCTGC ACACGCAGGG CGTTCGCGAA CAGCGCGCGC TGGTGGTAGA CGGCGTCAAG
AAGCTGCTCA AGCAACAGCA GTCGGCTACC CAGCTGGCCG AGGGCTGGAA GGATATTCCG
CTGTTACTGC TGTTCGACTG GTTCTGTGAC TGGTCGCACC TGATCCTGCG CTATCAGATG
ACCCAGGACG AGGAGGGCCT TGGCCTGGGT GACATGCGCA AGGTCATTCA ATACCTGGCG
CAAAAATCTT CTCGCGCCAA AGTGCTGGAA ATTCAGGACT GGATTCTGGC GCAGCGCCAG
AAAGTCATGT CCAAGGCCAA CCTCAATCGG GTGTTGCTGC TTGAAGCGTT ATTGGTGCAG
TGGGCAGGCC TGCCGGGACA GGCGTAG
 
Protein sequence
MAEAYPWQAS LWQQMAGRAQ HAHAYLLHGP AGIGKRALAE RLMASLLCKT PEGLDACGHC 
KSCLLLAAGS HPDNYVLEPE EADKPIKVDQ VRDLVSFVVQ TAQMGGRKVV LVEPVEAMNT
NAANALLKSL EEPSGNTVLL LVSHQPSRLL PTVKSRCVQQ ACPLPGEQMS LDWLSGALPD
CTQDERFELL TLAAGSPLAA VALHTQGVRE QRALVVDGVK KLLKQQQSAT QLAEGWKDIP
LLLLFDWFCD WSHLILRYQM TQDEEGLGLG DMRKVIQYLA QKSSRAKVLE IQDWILAQRQ
KVMSKANLNR VLLLEALLVQ WAGLPGQA