| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1652 |
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| Symbol | tmk |
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| ID | 3367154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1857020 |
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| End bp | 1857652 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637651995 |
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| Product | thymidylate kinase |
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| Protein accession | YP_234738 |
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| Protein GI | 66044897 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.401857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.314195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTGGCT TGTTTATCAC TCTTGAAGGC CCGGAAGGTG CAGGCAAAAG TACCAACCGT
GACTACCTGG CGGCGCAATT GCGTGCGCAG GGTGTTCAGG TACTGCTGAC CCGCGAGCCG
GGTGGTACTC CGCTGGCCGA GCGTGTTCGC GAGCTGTTGC TGGCGCCCAG CGACGAGGCC
ATGAGCGCTG ACACCGAGCT GCTGCTGGTG TTTGCGGCGC GTGCACAGCA TTTGGCCGAA
GTCATTCGTC CAGCGCTGGC GCGTGGCGAG GTGGTGCTCT GTGATCGGTT TACCGATGCG
ACCTACGCCT ATCAGGGCGG CGGCCGCGGC CTGTCCCATC AGCGTATTGC AGCGCTGGAA
CAGTTCGTTC AAGGCGACCT GCGCCCTGAC CTGACGCTGG TCTTCGACCT GCCGGTGGAG
ATCGGTCTGT CACGCGCCGC TGCACGCGGT CGGCTGGATC GCTTCGAGCA GGAAGGCAGA
GCTTTCTTCG ACGCTGTGCG CAGCACCTAT CTGGAACGGG CCAGGGCCGA GCCTGCGCGC
TATCGCCTGG TAGACGCCGC ACAGACTCTG GCCGACGTTC AGGCTTGCCT CGACACCTTG
CTGCCTCAGT TGCTGGAGCT GCAACGTGGC TGA
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| Protein sequence | MTGLFITLEG PEGAGKSTNR DYLAAQLRAQ GVQVLLTREP GGTPLAERVR ELLLAPSDEA
MSADTELLLV FAARAQHLAE VIRPALARGE VVLCDRFTDA TYAYQGGGRG LSHQRIAALE
QFVQGDLRPD LTLVFDLPVE IGLSRAAARG RLDRFEQEGR AFFDAVRSTY LERARAEPAR
YRLVDAAQTL ADVQACLDTL LPQLLELQRG
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