Gene Psyr_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1649 
Symbol 
ID3367151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1853805 
End bp1855049 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content61% 
IMG OID637651992 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_234735 
Protein GI66044894 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000779788 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.53214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGTA GACGCGTCGT GGTCACCGGG ATGGGCATGC TTTCGCCACT GGGCAATGAC 
GTGCCCAGCA GTTGGCAAGG CATTCTGGCG GGCCGCAGTG GCATTGGCCT TATCGAGCAC
ACGGACTTGT CAGCCTTCAC CACCCGCTTC GGCGGCTCGG TCAAGGGTTT CAACGTCGAA
GAATACCTCG CGCCCAAAGA AGCGCGCCGC CTCGATCTCT TTATTCAGTA TGGCCTTGCG
GCCAGCTTTC AGGCCGTGCG TAATGCAGGC CTCGAAGTCA CTGATGCAAA CCGTGAGCGC
ATCGGCGTTG CCATGGGGTC GGGCATCGGT GGTCTGACCA ATATCGAAAA CAGCAGTCGT
CTGCTGCACG AGCAGGGTCC TGGACGGATT TCGCCGTTCT TCGTTCCTGG CTCGATCATC
AATATGATTT CCGGTTTCCT GTCGATCCAC CTGGGCGCAC AGGGACCCAA TTACTCCATC
GCGACGGCTT GCACGACTGC AACCCACTGC ATCGGCATGG CGGCTCGCAA CATCGCCTAT
GACGAAGCGG ACGTGATGAT CGCCGGTGGC GCTGAAATGG CCGCCTGTGG ACTCGGTCTG
GGCGGCTTCG GTGCAGCGCG TGCGCTGTCG ACCCGCAACG ATGACCCGAC CCGCGCCAGT
CGCCCCTGGG ACAAGGGCCG TGATGGCTTT GTCCTGTCCG ACGGTGCCGG TGCCATGGTG
CTCGAAGAGC TTGAGCACGC CAAGGCGCGT GGCGCGACCA TTTATGCAGA GCTGGTCGGG
TTCGGCATGA GCGGCGACGC TTATCACATG ACTTCGCCAC CTGATGACGG CGCCGGTGCT
GCACGCTGCA TCGTCAATGC GTTGCGTGAT GCCAAGGTCA ATCCCGATCA GGTGCAGTAC
ATCAACGCAC ACGGTACGTC GACGCCTGCA GGCGATCTGG CCGAAGCTTC TGCGATCAAG
TCGGTATTCG GTGATCACGC CTACAAGCTG GCAGTCAGTT CGACCAAGTC GATGACCGGC
CACCTGCTGG GCGCCGCCGG TGCTGTCGAA GCGATCTTCA GCGTCCTGGC AATGGTTGAT
CAGGTGGCTC CGCCGACCAT CAACCTGGAT GAGCCAAGCG AAGGCTGCGA TCTGGACTTC
GTGCCTCACG AAGCGCGCCG CATGCCGATC GACGTCGTTC TGTCGAACTC CTTCGGCTTT
GGTGGCACCA ACGGCTCGCT GGTATTCCGT CGGTTCGCCG AGTAA
 
Protein sequence
MSRRRVVVTG MGMLSPLGND VPSSWQGILA GRSGIGLIEH TDLSAFTTRF GGSVKGFNVE 
EYLAPKEARR LDLFIQYGLA ASFQAVRNAG LEVTDANRER IGVAMGSGIG GLTNIENSSR
LLHEQGPGRI SPFFVPGSII NMISGFLSIH LGAQGPNYSI ATACTTATHC IGMAARNIAY
DEADVMIAGG AEMAACGLGL GGFGAARALS TRNDDPTRAS RPWDKGRDGF VLSDGAGAMV
LEELEHAKAR GATIYAELVG FGMSGDAYHM TSPPDDGAGA ARCIVNALRD AKVNPDQVQY
INAHGTSTPA GDLAEASAIK SVFGDHAYKL AVSSTKSMTG HLLGAAGAVE AIFSVLAMVD
QVAPPTINLD EPSEGCDLDF VPHEARRMPI DVVLSNSFGF GGTNGSLVFR RFAE