Gene Psyr_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1647 
SymbolfabG 
ID3367149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1852511 
End bp1853254 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID637651990 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_234733 
Protein GI66044892 
COG category[I] Lipid transport and metabolism
[R] General function prediction only
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00240946 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.512577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC AAGGTAAAGT GGCACTGGTA ACCGGTGCAA GTCGCGGCAT TGGCCAAGCC 
ATTGCTCTGG AATTGGGACG CAACGGTGCT GTTGTCGTGG GTACCGCGAC GTCAGAGTCC
GGCGCCGAGC GCATCAGTGC GACGTTCAAG GAAAACGGCA TCGAAGGCTT TGGCCTGATG
CTGGATGTCT GCGATGCCGA GTCTGTGAAT TCGGTTCTGT CCACCATTCA GGAGCGCGTC
GGCGCACCGT TGATTCTGGT CAATAACGCC GGTATCACCC GTGATAACCT GATGATGCGC
ATGAAAGATG ACGAATGGTA TGACGTCGTC AACACCAATC TGAACAGCCT TTTCCGTCTT
TCCAAGGGCG TTTTGCGTGG TATGACCAAG GCGCGTTGGG GGCGTATTAT CAGCATTGGT
TCGGTTGTGG GTGCCATGGG CAACGCCGGT CAAGTAAACT ATGCTTCCGC GAAGGCCGGT
CTGGAAGGCT TCAGTCGGGC TCTGGCCCGT GAAGTGGGCT CGCGGGCGGT CACCGTGAAT
TCGGTGGCAC CGGGTTTTAT CGATACCGAC ATGACGCGTG AGCTGCCTGA GGCTCAGCGT
GAGTCACTGA TTACCCAGAT ACCCCTGGGC CGTTTGGGGC AAGCCGAAGA GATTGCGCAC
GTAGTCGCTT TTCTTGCGTC CGAAGGCGCA GGCTACGTTA CCGGGGCCAC AATCCCTGTT
AACGGCGGCA TGTACATGAG CTAA
 
Protein sequence
MSLQGKVALV TGASRGIGQA IALELGRNGA VVVGTATSES GAERISATFK ENGIEGFGLM 
LDVCDAESVN SVLSTIQERV GAPLILVNNA GITRDNLMMR MKDDEWYDVV NTNLNSLFRL
SKGVLRGMTK ARWGRIISIG SVVGAMGNAG QVNYASAKAG LEGFSRALAR EVGSRAVTVN
SVAPGFIDTD MTRELPEAQR ESLITQIPLG RLGQAEEIAH VVAFLASEGA GYVTGATIPV
NGGMYMS