| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1641 |
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| Symbol | |
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| ID | 3367143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1847951 |
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| End bp | 1848949 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637651984 |
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| Product | peptidase S49, SppA |
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| Protein accession | YP_234727 |
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| Protein GI | 66044886 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.183448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG AATGGAAGGC ACCCGTTTCG CAAAGCGCGG ACGAGGGCAT CAATGGCAGG
GAAGAGGCTA AAAGCTGGAA GCTTCTTGAA AAGACGCTGC TGGCCAGTGT TCAGGAACAG
CGCCGCGCGC GTCGCTGGGG GATCTTTTTC AAGCTGCTGA CGTTCGCGTT CCTGTTTGTT
GCAGTGATCG TTCCGATGCT GGACTTCGAG GGCGGCACTT CGCGCCGTTC CAGTCACACT
GCGCTGATCG ATGTGCAGGG CGTGATTGCC GACAAGGAGG CGGCCAGTGC CGAGAACATC
GTCACTGCGC TGCAGAAGGC CTTCGAGGAT GAAAAGACCA AGGGTGTGAT TCTGCGTATC
AACAGCCCGG GCGGCAGTCC TGTGCAGTCG GGCTATGTCT ACGACGAAAT CCGTCGCCTG
CGCGCGGCGA AGCCGGACAT CAAGGTGTAT GCGGTCATTA CCGATCTCGG TGCTTCGGGC
GCTTATTACA TCGCCAGCGC CGCTGACCAG ATCTATGCCG ATAAGGCCAG TCTGGTGGGG
TCGATCGGTG TGACGGCAGC AGGTTTCGGC TTTGTCGGAG CCATGGACAA GCTCGGCGTT
GATCGTCGTA CCTATACCTC CGGCGAGCAC AAGGCGTTCC TTGACCCGTT CCAGCCACAG
AAGGCTGACG AAACGCAGTT CTGGCAGGGT GTGCTGGACA CGACTCATCG CCAGTTCATT
GCCAGTGTCA AACAGGGTCG TGGCGACCGC TTGAAGGACA AGGACCACCC AGAGCTGTTC
TCCGGGCTGA TCTGGACCGG CGAGCAGGCT GTTGCGCTCG GTCTGGTGGA TGGGTTGGGC
AGTGCGAGCT ATGTCGCGCG GGATGTGATC AAGGAGAAGG ACATCGTCGA GTACACCGTC
GAAGAGTCGC CTTTTGATCG CTTTTCGAAA AAGCTGGGCA CCAGCATCGC CGAGCGAATT
GCCATGCTGG TCGGTTTCAA CGGCCCAAGC CTGCGTTGA
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| Protein sequence | MSDEWKAPVS QSADEGINGR EEAKSWKLLE KTLLASVQEQ RRARRWGIFF KLLTFAFLFV
AVIVPMLDFE GGTSRRSSHT ALIDVQGVIA DKEAASAENI VTALQKAFED EKTKGVILRI
NSPGGSPVQS GYVYDEIRRL RAAKPDIKVY AVITDLGASG AYYIASAADQ IYADKASLVG
SIGVTAAGFG FVGAMDKLGV DRRTYTSGEH KAFLDPFQPQ KADETQFWQG VLDTTHRQFI
ASVKQGRGDR LKDKDHPELF SGLIWTGEQA VALGLVDGLG SASYVARDVI KEKDIVEYTV
EESPFDRFSK KLGTSIAERI AMLVGFNGPS LR
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