Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1631 |
Symbol | |
ID | 3367133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1834790 |
End bp | 1835578 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637651974 |
Product | hypothetical protein |
Protein accession | YP_234717 |
Protein GI | 66044876 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000356157 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC CCAACGGCGA GTTGCGCCCC AACCTGATCG CCCTGAAAAC CATCGTCTAC CGTGAAGTGC ACCGCTTCAT GCGGATCTGG CCGCAGACCC TGCTGCCGCC AGCCATCACC ATGGTCCTGT ACTTCGTCAT CTTCGGTAAC CTCATCGGTC GCCAGATCGG CGACATGGGT GGCTTTACCT ACATGCAGTA CATCGTGCCG GGGCTGATCA TGATGTCGGT GATCACCAAC TCCTACGGCA ACGTGGTCTC GAGCTTCTTT GGTGCCAAGT TTCAGCACTC CATCGAAGAA CTGATGGTGT CGCCGGTCTC GCCGCACACC ATTCTGGTCG GTTACACCCT GGGCGGTGTA TTGCGTGGTC TGATGGTCGG TTTCATCGTC ACCATGCTGT CGATGTTTTT CACCGACCTG CAAGTACATC ACTTGGGCGT GACCATTATC GTGGTGGTGT TGACCGCGAC AATTTTCTCG CTGCTGGGCT TCATCAACGC AGTGTTTGCG CGCAACTTCG ATGATATCTC GATCATCCCG ACCTTCGTCC TGACCCCGCT GACTTATCTG GGCGGCGTGT TCTACTCGAT CAACCTGTTG CCACCGTTCT GGCAGACCGT GTCGCTGGCC AACCCGGTCC TGCACATGGT CAATGCCTTC CGCTACGGCA TTCTGGGCGT CTCCGACATC AAGATCAGCA TCGCCCTGGC GTTCATGATC GTGGCGACCT TCGTGCTGTA TATCGGCTGC GCCAGGTTGC TGGTGAGCGG TCGCGGTATG CGTCAGTAA
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Protein sequence | MTVPNGELRP NLIALKTIVY REVHRFMRIW PQTLLPPAIT MVLYFVIFGN LIGRQIGDMG GFTYMQYIVP GLIMMSVITN SYGNVVSSFF GAKFQHSIEE LMVSPVSPHT ILVGYTLGGV LRGLMVGFIV TMLSMFFTDL QVHHLGVTII VVVLTATIFS LLGFINAVFA RNFDDISIIP TFVLTPLTYL GGVFYSINLL PPFWQTVSLA NPVLHMVNAF RYGILGVSDI KISIALAFMI VATFVLYIGC ARLLVSGRGM RQ
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