Gene Psyr_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1631 
Symbol 
ID3367133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1834790 
End bp1835578 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID637651974 
Producthypothetical protein 
Protein accessionYP_234717 
Protein GI66044876 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000356157 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC CCAACGGCGA GTTGCGCCCC AACCTGATCG CCCTGAAAAC CATCGTCTAC 
CGTGAAGTGC ACCGCTTCAT GCGGATCTGG CCGCAGACCC TGCTGCCGCC AGCCATCACC
ATGGTCCTGT ACTTCGTCAT CTTCGGTAAC CTCATCGGTC GCCAGATCGG CGACATGGGT
GGCTTTACCT ACATGCAGTA CATCGTGCCG GGGCTGATCA TGATGTCGGT GATCACCAAC
TCCTACGGCA ACGTGGTCTC GAGCTTCTTT GGTGCCAAGT TTCAGCACTC CATCGAAGAA
CTGATGGTGT CGCCGGTCTC GCCGCACACC ATTCTGGTCG GTTACACCCT GGGCGGTGTA
TTGCGTGGTC TGATGGTCGG TTTCATCGTC ACCATGCTGT CGATGTTTTT CACCGACCTG
CAAGTACATC ACTTGGGCGT GACCATTATC GTGGTGGTGT TGACCGCGAC AATTTTCTCG
CTGCTGGGCT TCATCAACGC AGTGTTTGCG CGCAACTTCG ATGATATCTC GATCATCCCG
ACCTTCGTCC TGACCCCGCT GACTTATCTG GGCGGCGTGT TCTACTCGAT CAACCTGTTG
CCACCGTTCT GGCAGACCGT GTCGCTGGCC AACCCGGTCC TGCACATGGT CAATGCCTTC
CGCTACGGCA TTCTGGGCGT CTCCGACATC AAGATCAGCA TCGCCCTGGC GTTCATGATC
GTGGCGACCT TCGTGCTGTA TATCGGCTGC GCCAGGTTGC TGGTGAGCGG TCGCGGTATG
CGTCAGTAA
 
Protein sequence
MTVPNGELRP NLIALKTIVY REVHRFMRIW PQTLLPPAIT MVLYFVIFGN LIGRQIGDMG 
GFTYMQYIVP GLIMMSVITN SYGNVVSSFF GAKFQHSIEE LMVSPVSPHT ILVGYTLGGV
LRGLMVGFIV TMLSMFFTDL QVHHLGVTII VVVLTATIFS LLGFINAVFA RNFDDISIIP
TFVLTPLTYL GGVFYSINLL PPFWQTVSLA NPVLHMVNAF RYGILGVSDI KISIALAFMI
VATFVLYIGC ARLLVSGRGM RQ