Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1628 |
Symbol | fadE |
ID | 3367130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1830446 |
End bp | 1832893 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651971 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_234714 |
Protein GI | 66044873 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTGT TGTGGATTGT TGTGCTGGTC GTCGGCATTG CCTGGCTGGC TCATCGGCGA ACCGCCCCGC TCCCGGCGCT TGGCGTGGTA GCTGTCTACC TGCTGGCCAT GGGTATTTTC AGTCACGCGC CAGGATGGCT GCTGACGGTG TTCTGGTTGC TCTGGCTGGC AGTGTTCGTA CCGGTAATGC TGCCCGATCT GCGCCGTAAG CATTTCACTG CACCGATGTT CAGCTGGTTT CAAAAAGTCC TGCCGCCGAT GTCGCAGACC GAGCGCGATG CGATCGATGC CGGCACGGTC TGGTGGGATG GCGAGCTGTT CAGCGGTCGT CCGGACTGGG ACAAGCTGCT GGCCTACCCG AAAGTCCAGC TGACCGAAGA GGAACAGGCC TTTATCGACG GGCCGACCGA AGAACTCTGC GCAATGGTCA GCGACTGGGA AATCGGCCAG GCCATGGACC TGCCGCCCGA AGCCTGGGCG CACATGAAAG CGCACGGCTT CTTCGCGCTG ATCATCCCCA AGGAATTCGG TGGCAAGGGC TTCTCGGCCT ACGCCCACTC TCAGGTGGCC ATGAAGCTGG CCACCCGCAG CGGCGACCTG GCCTCCACGG TGATGGTGCC CAACTCCCTC GGCCCTGCCG AATTGCTGCT GCATTACGGC ACCGACGAGC AACGCAATCA CTACTTGCCA CGTCTGGCAC GCGGCGAAGA CATTCCCTGC TTCGCGCTGA CCGGTCCGCT GGCCGGTTCC GATGCTGGCG CGATGACCGA CACCGGGATC ATCTGCAAAG GTCAGTGGCA GGGTGAAGAA GTCATCGGCC TGCGCCTGAC CTGGGAAAAA CGCTACATCA CCCTCGGCCC GGTCGCCACC CTGCTCGGCC TGGCCTTCAA GGCCCACGAT CCTGAGCACC TGCTCGGCGA AAAAGAAGAT CTGGGCATCA GCCTGGCGCT GATTCCGACC GATACGCCCG GCGTGGAGAT CGGCCGCCGT CACCTGCCTC TGGGAGCAGC GTTCATGAAC GGCCCCAACT CCGGCAAGGA CGTGTTCGTC CCGCTGAGCT ACCTGATCGG CGGTCAGCCG ATGCTGGGCA AGGGCTGGAT GATGCTGATG AACTGCCTGT CGGTGGGTCG TTCGATCTCG CTGCCGGCCG TCGGCACCGG CGCTGCCAAG TACACCAGCC TGGTCACCGG CCAGTACGCG AAGGTGCGTG AGCAATTCAA TGTGCCTCTC TCGGCATTCG AAGGCATCCA GGAAGCACTG GCGCGCATCG GCGGCAATGC CTGGCTGATG GACAGTGCGC GCATGCTGAC GGCCAATGCG GTCGACCTGG GCGAGAAGCC TTCAGTGCTC TCTGCGATCC TCAAATATCA CCTGACCGAG CGCGGCCGCG AGTGTATCGG TCACGCCATG GACGTGCATG GCGGCAAGGG CATCATCATG GGCCCGAACA ATTACCTGGG TCGCAACTGG CAAGGTGCGC CGATCTTCAT CACTGTCGAG GGCGCCAACA TCCTCTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCGAT TCGCTGCCAT CCGTTCGTAC TCAAGGAAAT GGCCTTGGCC GGGCGTGAGG ACAAACAGCA GGCGCTGATC GAGTTTGACA GCCTGCTGCT CAAACACATC GGCTTTGCGG TGAGCAATGC CGCCAGCACC TTTATCCTCA ACCTGGGTTT TGGCCATTTC GAAAGAGCGC CGGGCAACGG CCTGAGCCAG GGCTACTTCC GGGCGCTCAA CCGCCAGGCA GCAGCGTTCG CGATGCTCGC CGACTTGAGC ATGATGCTGC TCGGCGGCGA GCTGAAACGC CGCGAACGCC TGTCGGCCCG CCTGGGCGAC GTGCTCAGCC ACATGTACCT GGCCTCGGCA GCGCTCAAGC GTTATCACGA CCTCGGATCA CCGGACCACA TGAGCCCGTT GTTCCGCTGG GCCATGGAAG AAAGCCTCGG GCATTCGGAA CGGGCAATGG ACGAGATCCT CAGCAACTTC CCCAACCGGA TACTGGGCGG GGTGCTGCGT GCCGTAGTGT TCCCGTTCGG TCGCCGACAC AAGGGGCCTT CGGACAGACT GGATGCCGAA GTTGCTCAGG TACTGGGCCG CGCCAAGGGC GATCCGACGC TGGAAGAGTT GCTGGCAGGC TGCTATCGCC CGCAATCGGC AGACGACCCG GTCGGCGCGC TGCAACAGGC CATCGACCTG CTCAGCGCTG CGTATCCACT GCACAAGAAG CTGCAAGTGG CAATCAAGAG TGGTCAGGTC AAGCCGGACG CTGGCGAGCC GGTCATCGAC GCCGCGCTGC GCATCGGTGT GTTGCAGGCC GACGAAGCGC AGACCCTGCG TACCGCCGAG GCAGCCCGCC GCAAGGTGAT CGATGTGGAT GATTTCGACA AGGAGGAACT GACCCTGGCA GCCGGCAAGA TTCGCTGA
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Protein sequence | MLLLWIVVLV VGIAWLAHRR TAPLPALGVV AVYLLAMGIF SHAPGWLLTV FWLLWLAVFV PVMLPDLRRK HFTAPMFSWF QKVLPPMSQT ERDAIDAGTV WWDGELFSGR PDWDKLLAYP KVQLTEEEQA FIDGPTEELC AMVSDWEIGQ AMDLPPEAWA HMKAHGFFAL IIPKEFGGKG FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGEDIPC FALTGPLAGS DAGAMTDTGI ICKGQWQGEE VIGLRLTWEK RYITLGPVAT LLGLAFKAHD PEHLLGEKED LGISLALIPT DTPGVEIGRR HLPLGAAFMN GPNSGKDVFV PLSYLIGGQP MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA KVREQFNVPL SAFEGIQEAL ARIGGNAWLM DSARMLTANA VDLGEKPSVL SAILKYHLTE RGRECIGHAM DVHGGKGIIM GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDKQQALI EFDSLLLKHI GFAVSNAAST FILNLGFGHF ERAPGNGLSQ GYFRALNRQA AAFAMLADLS MMLLGGELKR RERLSARLGD VLSHMYLASA ALKRYHDLGS PDHMSPLFRW AMEESLGHSE RAMDEILSNF PNRILGGVLR AVVFPFGRRH KGPSDRLDAE VAQVLGRAKG DPTLEELLAG CYRPQSADDP VGALQQAIDL LSAAYPLHKK LQVAIKSGQV KPDAGEPVID AALRIGVLQA DEAQTLRTAE AARRKVIDVD DFDKEELTLA AGKIR
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