Gene Psyr_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1628 
SymbolfadE 
ID3367130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1830446 
End bp1832893 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content63% 
IMG OID637651971 
Productacyl-CoA dehydrogenase 
Protein accessionYP_234714 
Protein GI66044873 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGT TGTGGATTGT TGTGCTGGTC GTCGGCATTG CCTGGCTGGC TCATCGGCGA 
ACCGCCCCGC TCCCGGCGCT TGGCGTGGTA GCTGTCTACC TGCTGGCCAT GGGTATTTTC
AGTCACGCGC CAGGATGGCT GCTGACGGTG TTCTGGTTGC TCTGGCTGGC AGTGTTCGTA
CCGGTAATGC TGCCCGATCT GCGCCGTAAG CATTTCACTG CACCGATGTT CAGCTGGTTT
CAAAAAGTCC TGCCGCCGAT GTCGCAGACC GAGCGCGATG CGATCGATGC CGGCACGGTC
TGGTGGGATG GCGAGCTGTT CAGCGGTCGT CCGGACTGGG ACAAGCTGCT GGCCTACCCG
AAAGTCCAGC TGACCGAAGA GGAACAGGCC TTTATCGACG GGCCGACCGA AGAACTCTGC
GCAATGGTCA GCGACTGGGA AATCGGCCAG GCCATGGACC TGCCGCCCGA AGCCTGGGCG
CACATGAAAG CGCACGGCTT CTTCGCGCTG ATCATCCCCA AGGAATTCGG TGGCAAGGGC
TTCTCGGCCT ACGCCCACTC TCAGGTGGCC ATGAAGCTGG CCACCCGCAG CGGCGACCTG
GCCTCCACGG TGATGGTGCC CAACTCCCTC GGCCCTGCCG AATTGCTGCT GCATTACGGC
ACCGACGAGC AACGCAATCA CTACTTGCCA CGTCTGGCAC GCGGCGAAGA CATTCCCTGC
TTCGCGCTGA CCGGTCCGCT GGCCGGTTCC GATGCTGGCG CGATGACCGA CACCGGGATC
ATCTGCAAAG GTCAGTGGCA GGGTGAAGAA GTCATCGGCC TGCGCCTGAC CTGGGAAAAA
CGCTACATCA CCCTCGGCCC GGTCGCCACC CTGCTCGGCC TGGCCTTCAA GGCCCACGAT
CCTGAGCACC TGCTCGGCGA AAAAGAAGAT CTGGGCATCA GCCTGGCGCT GATTCCGACC
GATACGCCCG GCGTGGAGAT CGGCCGCCGT CACCTGCCTC TGGGAGCAGC GTTCATGAAC
GGCCCCAACT CCGGCAAGGA CGTGTTCGTC CCGCTGAGCT ACCTGATCGG CGGTCAGCCG
ATGCTGGGCA AGGGCTGGAT GATGCTGATG AACTGCCTGT CGGTGGGTCG TTCGATCTCG
CTGCCGGCCG TCGGCACCGG CGCTGCCAAG TACACCAGCC TGGTCACCGG CCAGTACGCG
AAGGTGCGTG AGCAATTCAA TGTGCCTCTC TCGGCATTCG AAGGCATCCA GGAAGCACTG
GCGCGCATCG GCGGCAATGC CTGGCTGATG GACAGTGCGC GCATGCTGAC GGCCAATGCG
GTCGACCTGG GCGAGAAGCC TTCAGTGCTC TCTGCGATCC TCAAATATCA CCTGACCGAG
CGCGGCCGCG AGTGTATCGG TCACGCCATG GACGTGCATG GCGGCAAGGG CATCATCATG
GGCCCGAACA ATTACCTGGG TCGCAACTGG CAAGGTGCGC CGATCTTCAT CACTGTCGAG
GGCGCCAACA TCCTCTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCGAT TCGCTGCCAT
CCGTTCGTAC TCAAGGAAAT GGCCTTGGCC GGGCGTGAGG ACAAACAGCA GGCGCTGATC
GAGTTTGACA GCCTGCTGCT CAAACACATC GGCTTTGCGG TGAGCAATGC CGCCAGCACC
TTTATCCTCA ACCTGGGTTT TGGCCATTTC GAAAGAGCGC CGGGCAACGG CCTGAGCCAG
GGCTACTTCC GGGCGCTCAA CCGCCAGGCA GCAGCGTTCG CGATGCTCGC CGACTTGAGC
ATGATGCTGC TCGGCGGCGA GCTGAAACGC CGCGAACGCC TGTCGGCCCG CCTGGGCGAC
GTGCTCAGCC ACATGTACCT GGCCTCGGCA GCGCTCAAGC GTTATCACGA CCTCGGATCA
CCGGACCACA TGAGCCCGTT GTTCCGCTGG GCCATGGAAG AAAGCCTCGG GCATTCGGAA
CGGGCAATGG ACGAGATCCT CAGCAACTTC CCCAACCGGA TACTGGGCGG GGTGCTGCGT
GCCGTAGTGT TCCCGTTCGG TCGCCGACAC AAGGGGCCTT CGGACAGACT GGATGCCGAA
GTTGCTCAGG TACTGGGCCG CGCCAAGGGC GATCCGACGC TGGAAGAGTT GCTGGCAGGC
TGCTATCGCC CGCAATCGGC AGACGACCCG GTCGGCGCGC TGCAACAGGC CATCGACCTG
CTCAGCGCTG CGTATCCACT GCACAAGAAG CTGCAAGTGG CAATCAAGAG TGGTCAGGTC
AAGCCGGACG CTGGCGAGCC GGTCATCGAC GCCGCGCTGC GCATCGGTGT GTTGCAGGCC
GACGAAGCGC AGACCCTGCG TACCGCCGAG GCAGCCCGCC GCAAGGTGAT CGATGTGGAT
GATTTCGACA AGGAGGAACT GACCCTGGCA GCCGGCAAGA TTCGCTGA
 
Protein sequence
MLLLWIVVLV VGIAWLAHRR TAPLPALGVV AVYLLAMGIF SHAPGWLLTV FWLLWLAVFV 
PVMLPDLRRK HFTAPMFSWF QKVLPPMSQT ERDAIDAGTV WWDGELFSGR PDWDKLLAYP
KVQLTEEEQA FIDGPTEELC AMVSDWEIGQ AMDLPPEAWA HMKAHGFFAL IIPKEFGGKG
FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGEDIPC
FALTGPLAGS DAGAMTDTGI ICKGQWQGEE VIGLRLTWEK RYITLGPVAT LLGLAFKAHD
PEHLLGEKED LGISLALIPT DTPGVEIGRR HLPLGAAFMN GPNSGKDVFV PLSYLIGGQP
MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA KVREQFNVPL SAFEGIQEAL
ARIGGNAWLM DSARMLTANA VDLGEKPSVL SAILKYHLTE RGRECIGHAM DVHGGKGIIM
GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDKQQALI
EFDSLLLKHI GFAVSNAAST FILNLGFGHF ERAPGNGLSQ GYFRALNRQA AAFAMLADLS
MMLLGGELKR RERLSARLGD VLSHMYLASA ALKRYHDLGS PDHMSPLFRW AMEESLGHSE
RAMDEILSNF PNRILGGVLR AVVFPFGRRH KGPSDRLDAE VAQVLGRAKG DPTLEELLAG
CYRPQSADDP VGALQQAIDL LSAAYPLHKK LQVAIKSGQV KPDAGEPVID AALRIGVLQA
DEAQTLRTAE AARRKVIDVD DFDKEELTLA AGKIR