Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1614 |
Symbol | |
ID | 3367116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1816749 |
End bp | 1817681 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651957 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | YP_234700 |
Protein GI | 66044859 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.558883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCC CGCGTCTTAA AGCCAGTTTC CTTCACCCCC GTTTCTGGCC GCTATGGCTG GGGCTGGGGC TCTTGTGGCT GATTGTTCAA TTGCCATTTT GTGTTCTGCT GGTCATCGGT CGGGCACTGG GCGCCATCAT GTACCGTGTG GCCACTGATC GAAAAAAAAT CGCGTCGCGC AATCTGGAGC TGTGCTTCCC GCATTTGTCC GCGGCCGAGC GCAAGCGTCT GCTCAAGGAA AACTTCGCCT CCACCGGGAT TGCCTTTTTC GAGATGGCGA TGAGCTGGTG GTGGTCGAAA AAACGTCTGG CCAGGCTTGC CCACGTCGAA GGGCTCGAGC ATTTGCAGAA TGCCCAGGAA AAAGGCGAGG GCGTGATTCT GATGGCGCTG CATTTCACCA CGCTGGAAAT CGGCGCGGCG CTTTTGGGCC AGCAGCACAC CATCGACGGC ATGTATCGCG AACACAAGAG CCCGTTGTTC GACTTCGTCC AGCGTCGCGG GCGCGAGCGC CATAACCTGG ATTCGCTGGC TGTCGAGCGA GACGACGTGC GCGGCATGCT CAAGTTACTG CGTGCCGGCC GGGCCATCTG GTATGCGCCG GATCAGGACT ATGGCGCCAA GCAAAGCATT TTTGTGCCGC TGTTCGGCAT CCAGGCCGCG ACCGTGACCG CCACCAGCAA GTTCGCCCGC CTGGGCCGTG CGCAGGTTGT GCCCTTCACT CAGCGGCGTC TGGCAGACGG CAGTGGTTAC CGGCTGGTGA TCCATCCGCC GCTGGATAAC TTTCCGGGGG AAAGCGACGA AGCCGATTGC CTGCGCATCA ACCAATGGGT GGAAAAGGCC GTCACTGAAT GCCCGGAACA ATATCTTTGG GCCCATCGAC GCTTCAAAAG TCGACCGCCA GGTGAACCGA AGCTATACAA CAAGCATAAA TAA
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Protein sequence | MDRPRLKASF LHPRFWPLWL GLGLLWLIVQ LPFCVLLVIG RALGAIMYRV ATDRKKIASR NLELCFPHLS AAERKRLLKE NFASTGIAFF EMAMSWWWSK KRLARLAHVE GLEHLQNAQE KGEGVILMAL HFTTLEIGAA LLGQQHTIDG MYREHKSPLF DFVQRRGRER HNLDSLAVER DDVRGMLKLL RAGRAIWYAP DQDYGAKQSI FVPLFGIQAA TVTATSKFAR LGRAQVVPFT QRRLADGSGY RLVIHPPLDN FPGESDEADC LRINQWVEKA VTECPEQYLW AHRRFKSRPP GEPKLYNKHK
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