Gene Psyr_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1614 
Symbol 
ID3367116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1816749 
End bp1817681 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID637651957 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_234700 
Protein GI66044859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.558883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC CGCGTCTTAA AGCCAGTTTC CTTCACCCCC GTTTCTGGCC GCTATGGCTG 
GGGCTGGGGC TCTTGTGGCT GATTGTTCAA TTGCCATTTT GTGTTCTGCT GGTCATCGGT
CGGGCACTGG GCGCCATCAT GTACCGTGTG GCCACTGATC GAAAAAAAAT CGCGTCGCGC
AATCTGGAGC TGTGCTTCCC GCATTTGTCC GCGGCCGAGC GCAAGCGTCT GCTCAAGGAA
AACTTCGCCT CCACCGGGAT TGCCTTTTTC GAGATGGCGA TGAGCTGGTG GTGGTCGAAA
AAACGTCTGG CCAGGCTTGC CCACGTCGAA GGGCTCGAGC ATTTGCAGAA TGCCCAGGAA
AAAGGCGAGG GCGTGATTCT GATGGCGCTG CATTTCACCA CGCTGGAAAT CGGCGCGGCG
CTTTTGGGCC AGCAGCACAC CATCGACGGC ATGTATCGCG AACACAAGAG CCCGTTGTTC
GACTTCGTCC AGCGTCGCGG GCGCGAGCGC CATAACCTGG ATTCGCTGGC TGTCGAGCGA
GACGACGTGC GCGGCATGCT CAAGTTACTG CGTGCCGGCC GGGCCATCTG GTATGCGCCG
GATCAGGACT ATGGCGCCAA GCAAAGCATT TTTGTGCCGC TGTTCGGCAT CCAGGCCGCG
ACCGTGACCG CCACCAGCAA GTTCGCCCGC CTGGGCCGTG CGCAGGTTGT GCCCTTCACT
CAGCGGCGTC TGGCAGACGG CAGTGGTTAC CGGCTGGTGA TCCATCCGCC GCTGGATAAC
TTTCCGGGGG AAAGCGACGA AGCCGATTGC CTGCGCATCA ACCAATGGGT GGAAAAGGCC
GTCACTGAAT GCCCGGAACA ATATCTTTGG GCCCATCGAC GCTTCAAAAG TCGACCGCCA
GGTGAACCGA AGCTATACAA CAAGCATAAA TAA
 
Protein sequence
MDRPRLKASF LHPRFWPLWL GLGLLWLIVQ LPFCVLLVIG RALGAIMYRV ATDRKKIASR 
NLELCFPHLS AAERKRLLKE NFASTGIAFF EMAMSWWWSK KRLARLAHVE GLEHLQNAQE
KGEGVILMAL HFTTLEIGAA LLGQQHTIDG MYREHKSPLF DFVQRRGRER HNLDSLAVER
DDVRGMLKLL RAGRAIWYAP DQDYGAKQSI FVPLFGIQAA TVTATSKFAR LGRAQVVPFT
QRRLADGSGY RLVIHPPLDN FPGESDEADC LRINQWVEKA VTECPEQYLW AHRRFKSRPP
GEPKLYNKHK