| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1610 |
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| Symbol | |
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| ID | 3367112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1813864 |
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| End bp | 1814499 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651953 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_234696 |
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| Protein GI | 66044855 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00911925 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.237577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTGT CGAACATCCG CATCATTCAT CAGGACGCCG CCGTTCTGGT GATCGATAAG
CCTACCCTGC TGCTTTCCGT TCCCGGTCGT GCCGACGACA ACAAGGATTG CCTGATTACC
CGCCTGCAGG AAAACGGTTA CCCCGAAGCG CGTATCGTCC ATCGTCTGGA CTGGGAAACC
TCGGGCATCA TTCTGCTGGC CCGCGATGCC GATACGCATC GCGAACTGTC GCGTCAGTTT
CATGACCGCG AAACCGAGAA AGCCTACACC GCGCTGTGCT GGGGCCAACC GTCCCTGGAC
AGCGGCAGCA TCGATCTGCC GTTGCGCTAC GACCCGCCTA CCAAGCCCCG GCATGTGGTG
GACCACGAGG GTGGCAAACA CGCGCTGACG TTCTGGAAGG TTGTCGAGCG GCATGACACT
TATTGTCGCG TCGAGCTCAC GCCGATCACT GGCCGCTCGC ATCAGTTGCG TGTGCACATG
CTGTCGATCG GGCATCCGCT GTTGGGTGAT GGGCTGTACG CGCATCCGGA AGCGCTGGCG
GCCTATCCAC GTCTGTGTCT GCATGCCAGC ATGCTGAGCT TCACGCATCC CGGGACTGGC
GAGCGAATGA CCTTCGAGTG TGCTGCGCCG TTCTGA
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| Protein sequence | MPLSNIRIIH QDAAVLVIDK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA RIVHRLDWET
SGIILLARDA DTHRELSRQF HDRETEKAYT ALCWGQPSLD SGSIDLPLRY DPPTKPRHVV
DHEGGKHALT FWKVVERHDT YCRVELTPIT GRSHQLRVHM LSIGHPLLGD GLYAHPEALA
AYPRLCLHAS MLSFTHPGTG ERMTFECAAP F
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