Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1562 |
Symbol | |
ID | 3367062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1758149 |
End bp | 1759825 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637651903 |
Product | sulfatase |
Protein accession | YP_234648 |
Protein GI | 66044807 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0048353 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00604368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGATG CATATTCATT CGATAAGCAG ACCACGATGC CGACACCCAG AACTGTTCGT CCAGAAGTTG TAACCCTACT TGCCAGTGCG TTTCTGTTAC TGGGTTTCAA TATCAATCTC TGGCAGCATC TTTTCTCGAT TACCAGCGCC GATAGTAAAG GGTTGGCCAT GCGCTTTGCG TTTGGCTTGA TGATTTTCTG CGTGTTCAAT ATCGTGCTGA CGCTGTTGGC ATTCCGTCGT GTGTTTAAAC CGGTGTTGAT CAGTCTGTTT ATGATCAGCG CGGGGGTGGT TTATTTCATG ACCGAATACG GGGTCATGAT CGACGCTGGC ATGTTTCGAA ACTTCGCCGA AACCAACGTT ACGGAAGTGC AGGGGCTGCT GTCTTTAAAA CTGGCCTTGT ATATCCTTCT GCTCGGCGTA GTGCCCTCGC TGATACTCTG GAAACTGCCG ATCAGCTACC GTCGCTGGCA CCTTGAACTG TTCAGCAAAC TGCTGGTGAC GGTTGCGTGC TGCGTGGCAA TCGGCGGCGT TGCACTGGCC AATTACCAGG GGCTGTCGTC ATTGTTTCGC AATCACCATG AGTTGCGCCT GATGGTGGTG CCAAGCAATT ACATTGGTGC GTCGCTGGGC TACCTGAGTG AGCAGGTGCT CTCTGCAAGG CGCCCGTTCG TCAAGATCGG CGAGGACGCC AAACGTTCTG CGGATTGGGC CACGCATGCT CGAAAATCGT TGACCGTGCT GGTGGTCGGC GAAAGTGCCC GGGCCGAGAA CTTCGGGATC CTTGGCTATG GTCGTAACAC CACGCCCAAC CTCAACAAGG AAAGCGGGCT GGTGGCGTTT ACCGATGTGT ATTCCTGCGG CACCGAAACC GCCGTGTCGG TGCCTTGCAT GTTCTCCAAC ATGGGGCGCA AGAATTACAA CGCTACCCAG GCGCGCAATC AGGAAGGCTT GCTGGATGTA CTGAAACGCG CGGGCATAGA CGTGATATGG CGTGACAATC AGGCCGGCTG CAAAGGCACC TGTGATCGAG TGACCTTCCA GGACGTGAGC AATCTCAAGG ACCCGCTGTT GTGCAACAAC CATGAATGCC GGGACGAGAT ACTCTTGCAA AACCTGCAGA CCTTTATCGA CAGCCTCGAC AAGGACACGG TGCTTGTTCT GCACCAGATG GGCAGCCACG GGCCTGAATA CTACAAACGT TACCCAAAAG AGTTTGAAAA GTTTACCCCG GTGTGTGAAA GCAATGCGCT GAACAATTGC AGCCGGGACA GCATCGTCAA TGCGTACGAC AATACGTTGC TTTACACCGA CCATGTACTG TCCACGCTGA TTGATCTTTT ACGCGCCAAT CAAAACAAGG TCGATACCGC CATGGTCTAC CTGTCGGACC ATGGCGAGTC GCTGGGCGAG TACAACCTGT TCCTGCACGG CACGCCTTAT GTGCTGGCGC CTGATCAGCA AAAGCATGTG CCGATGATGG TCTGGTTGTC CGATACCTAT CAGAAGTCCT TTGCCGTCAC GCCGGAGTGC CTGGCCAAAC AGCGTAACGC ACCGTTGAGT CAGGACAATC TTTTCCATTC CATGCTCGGC CTGCTGAAAG TCGACACCAA GGTCTATGAC CCCAGTCTCG ATATGTTTGC CGGATGCCGC AGCGAGTTGG CGGCCACCGA CAAGTAA
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Protein sequence | MPDAYSFDKQ TTMPTPRTVR PEVVTLLASA FLLLGFNINL WQHLFSITSA DSKGLAMRFA FGLMIFCVFN IVLTLLAFRR VFKPVLISLF MISAGVVYFM TEYGVMIDAG MFRNFAETNV TEVQGLLSLK LALYILLLGV VPSLILWKLP ISYRRWHLEL FSKLLVTVAC CVAIGGVALA NYQGLSSLFR NHHELRLMVV PSNYIGASLG YLSEQVLSAR RPFVKIGEDA KRSADWATHA RKSLTVLVVG ESARAENFGI LGYGRNTTPN LNKESGLVAF TDVYSCGTET AVSVPCMFSN MGRKNYNATQ ARNQEGLLDV LKRAGIDVIW RDNQAGCKGT CDRVTFQDVS NLKDPLLCNN HECRDEILLQ NLQTFIDSLD KDTVLVLHQM GSHGPEYYKR YPKEFEKFTP VCESNALNNC SRDSIVNAYD NTLLYTDHVL STLIDLLRAN QNKVDTAMVY LSDHGESLGE YNLFLHGTPY VLAPDQQKHV PMMVWLSDTY QKSFAVTPEC LAKQRNAPLS QDNLFHSMLG LLKVDTKVYD PSLDMFAGCR SELAATDK
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