Gene Psyr_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1550 
Symbol 
ID3367049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1743360 
End bp1744118 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content61% 
IMG OID637651891 
ProductBeta-lactamase-like 
Protein accessionYP_234637 
Protein GI66044796 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.294376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0288918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTTCG CGGTTCTCGG CAGCGGCAGT CGTGGCAACG GCACGCTGGT CGCAAGCAAC 
GATACGTACG TACTGGTCGA TTGCGGTTTC TCCCTGCGGG AAACCGAGCG GCGCCTGGCT
CGTCTGGGCG TCTCGGCAAG CCAGCTGAGC GCCATACTGG TGACCCACGA ACATGCCGAT
CATGTGCATG GCGTGGGTTT GCTGTCGCGG CGCTACAATG TGCCGGTCTA CCTCAGCAGC
GGGACGTTGC GCGGAATGCG CAAGCCGGTG GAAATTGCCG GCCTGCTGGC AGGCGGGGAG
AGTCTGCAGA TCGGCGCACT GGACATCGAC GTGGTGTCGG TCGCTCACGA TGCGCTTGAA
CCGACGCAGT TCGTCTTCAG TGACGGCAAG CGCCGCTTCG GCCTGCTGAC CGACCTTGGC
TCTTACTGCT CCAACGTATT ACAGCGTTAT CAAGGCCTGG ATGCCTTGAT GATCGAGGCC
AATCACTGTC GCGACATGCT TGCCCGAGGC CAGTATCCGG TCTTTCTCAA GCAGCGCGTT
GGCTGTGAAA CCGGTCATTT GAACAACCAT CAGGCCGCCA GCCTGGTGAG CGAACTGGGA
TGGCAGGACC TTCAGCACTT GGTGCTGGCG CATCTCAGCA GCAAGAACAA CCTGCCGCAT
CTGGCCCGGC AATGTTTCGT CGACACCCTC GGGTGCGACC CGGACTGGCT GCAACTGGCC
GATCAAGATT CAGGGCTCGA CTGGCGACAT ATCGCCTAG
 
Protein sequence
MRFAVLGSGS RGNGTLVASN DTYVLVDCGF SLRETERRLA RLGVSASQLS AILVTHEHAD 
HVHGVGLLSR RYNVPVYLSS GTLRGMRKPV EIAGLLAGGE SLQIGALDID VVSVAHDALE
PTQFVFSDGK RRFGLLTDLG SYCSNVLQRY QGLDALMIEA NHCRDMLARG QYPVFLKQRV
GCETGHLNNH QAASLVSELG WQDLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQLA
DQDSGLDWRH IA