Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1550 |
Symbol | |
ID | 3367049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1743360 |
End bp | 1744118 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651891 |
Product | Beta-lactamase-like |
Protein accession | YP_234637 |
Protein GI | 66044796 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.294376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0288918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTTTCG CGGTTCTCGG CAGCGGCAGT CGTGGCAACG GCACGCTGGT CGCAAGCAAC GATACGTACG TACTGGTCGA TTGCGGTTTC TCCCTGCGGG AAACCGAGCG GCGCCTGGCT CGTCTGGGCG TCTCGGCAAG CCAGCTGAGC GCCATACTGG TGACCCACGA ACATGCCGAT CATGTGCATG GCGTGGGTTT GCTGTCGCGG CGCTACAATG TGCCGGTCTA CCTCAGCAGC GGGACGTTGC GCGGAATGCG CAAGCCGGTG GAAATTGCCG GCCTGCTGGC AGGCGGGGAG AGTCTGCAGA TCGGCGCACT GGACATCGAC GTGGTGTCGG TCGCTCACGA TGCGCTTGAA CCGACGCAGT TCGTCTTCAG TGACGGCAAG CGCCGCTTCG GCCTGCTGAC CGACCTTGGC TCTTACTGCT CCAACGTATT ACAGCGTTAT CAAGGCCTGG ATGCCTTGAT GATCGAGGCC AATCACTGTC GCGACATGCT TGCCCGAGGC CAGTATCCGG TCTTTCTCAA GCAGCGCGTT GGCTGTGAAA CCGGTCATTT GAACAACCAT CAGGCCGCCA GCCTGGTGAG CGAACTGGGA TGGCAGGACC TTCAGCACTT GGTGCTGGCG CATCTCAGCA GCAAGAACAA CCTGCCGCAT CTGGCCCGGC AATGTTTCGT CGACACCCTC GGGTGCGACC CGGACTGGCT GCAACTGGCC GATCAAGATT CAGGGCTCGA CTGGCGACAT ATCGCCTAG
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Protein sequence | MRFAVLGSGS RGNGTLVASN DTYVLVDCGF SLRETERRLA RLGVSASQLS AILVTHEHAD HVHGVGLLSR RYNVPVYLSS GTLRGMRKPV EIAGLLAGGE SLQIGALDID VVSVAHDALE PTQFVFSDGK RRFGLLTDLG SYCSNVLQRY QGLDALMIEA NHCRDMLARG QYPVFLKQRV GCETGHLNNH QAASLVSELG WQDLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQLA DQDSGLDWRH IA
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