Gene Psyr_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1407 
Symbol 
ID3366904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1594073 
End bp1594819 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID637651748 
Producthypothetical protein 
Protein accessionYP_234496 
Protein GI66044655 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.133281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC ATTCTAAGTG GGCGAACATC AAGCACCGCA AAGAGCGTCA GGATGCCAAA 
AAAGGCAAGA TTTTCACCAA GTGGATCCGT GAGCTGACCG TTGCTGCGCG TCAGGGCGGT
GGTGATCCCG GTTCCAACCC GCGTCTGCGT CTGGCGCTGG ACAAGGCGCT TGGTGCGAAC
ATGACCCGTG ACACCATTGA TCGTGCGGTG GCGCGAGGGG TAGGGGCCTC CGACGGTGAT
GATGTCGAGG AGCTGGGTTA CGAGGGCTAC GGTCCGGGCG GCGTGGCGAT CATGGTCGAA
ACCATGACCG ACAACCGCAA CCGTACCGCG GCGGCTGTGC GCCATGCATT CACCAAATGC
GGCGGCAATC TCGGCACCGA CGGCTCTGTT GCCTACCTGT TCGATCGCAA GGGGCAGATC
TCCTTCGCTG CCGGGGTCGA TGAGGATTCG CTGATCGAGG CTGCCATGGA GGCTGATGCT
GACGATGTCG TGACCAACGA AGACGGCTCG ATCGATGTGT TCACATCGTT CTCCGGGTTT
TATGCGGTGC GTAACGCATT GGAGGCTGCG GGTTTCAAGG CTGCAGACGC AGAGATTGTC
ATGCTGCCGA CCACCAGTGC CGTGCTTGAT CTGGAAACCG CTGAAAAGGT ACTCAAGCTG
ATTGATATGC TCGAAGACCT GGATGACGTG CAGAACGTGT ATTCAAATGC GGAGATCCCG
GACGAAGTGA TGGAGCAACT GGGCTGA
 
Protein sequence
MAGHSKWANI KHRKERQDAK KGKIFTKWIR ELTVAARQGG GDPGSNPRLR LALDKALGAN 
MTRDTIDRAV ARGVGASDGD DVEELGYEGY GPGGVAIMVE TMTDNRNRTA AAVRHAFTKC
GGNLGTDGSV AYLFDRKGQI SFAAGVDEDS LIEAAMEADA DDVVTNEDGS IDVFTSFSGF
YAVRNALEAA GFKAADAEIV MLPTTSAVLD LETAEKVLKL IDMLEDLDDV QNVYSNAEIP
DEVMEQLG