Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1392 |
Symbol | rimO |
ID | 3366887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1572595 |
End bp | 1573938 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651731 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_234481 |
Protein GI | 66044640 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCG TCACCACGCC GTCCGCCCCC AAGGTTGGAT TCGTTTCACT GGGTTGCCCA AAGGCACTCG TTGACTCTGA ACGCATCCTG ACCCAGCTGC GTATGGAAGG TTACGAAGTC GTTGCGACCT ACGAGGACGC CGACGTGGTC GTGGTCAACA CCTGTGGCTT CATCGATACA GCCAAGGCCG AGTCGCTGGA AGTGATCGGC GAAGCCATCA AGGAAAACGG CAAGGTCATC GTGACCGGCT GCATGGGCGT CGATGCGAGT GTCATTCGCA ATGTGCACCC GAGCGTGCTG TCGGTGACCG GCCCGCAGCA GTACGAGCAG GTGGTCAACG CAGTGCACGA TGTGGTGCCG CCGCGCAAGG ATCACAACCC GTTGATCGAC CTGGTGCCGC CACAAGGCGT CAAGCTGACC CCGCGTCACT ACGCGTATCT GAAAATTTCC GAAGGCTGCA ACCACAGTTG CAGCTTCTGC ATCATCCCGT CGATGCGCGG CAAGCTGGTC AGCCGCCCGG TGGGTGATGT ACTGGACGAG GCCAAGCGCC TGGTCAAATC CGGGGTGAAG GAACTGCTGG TCATTTCCCA GGACACCAGC GCCTATGGCG TTGACGTCAA ATACCGCACC GGTTTCTGGG ACGGTCAGCC GGTCAAAACC CGCATGACCG AGCTGTGCCA GGCGCTGGGC TCGATGGGTG TCTGGGTGCG CCTGCACTAT GTCTACCCGT ACCCGCACGT CGACGAACTG ATCCCGTTGA TGGCCGCGGG CAAGATCCTG CCGTACCTGG ACATCCCGTT CCAGCACGCC AGCCCGAAAA TCCTCAAGCT GATGAAGCGT CCGGCCTTTG AAGACAAGAC GCTGGCGCGC ATCAAGAACT GGCGCGAGCA GTGCCCGGAC CTGATCATCC GCTCGACCTT CATCGTCGGT TTTCCCGGTG AAACCGAAGA AGACTTCCAG TACCTGCTGG ACTGGCTGAC CGAAGCGCAG CTGGACCGGG TTGGCTGCTT CCAGTACTCG CCGGTTGAAG GCGCGCCCGC CAATCTGCTG GACGCGGCCA TCGTGCCGGA CGACGTCAAG CAGGATCGCT GGGATCGCTT CATGGCTCAT CAGCAGGCAA TCAGCGCTGC GCGCCTGCAG ATGAAGATCG GCAAGGAAAT CGAAGTGCTG ATCGACGAAG TCGACGATCG TGGTGCCGTG GGCCGCTGCT TCTTCGACGC CCCGGAAATC GACGGCAACG TGTTCATCGG CCTGGACGAC GGCAGCACCG TTCAGCCCGG GGACAAGATC ATGTGCCGGG TGACCGATGC CGACGAATAC GACCTGTGGG CCGAGATGCT CTAA
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Protein sequence | MSTVTTPSAP KVGFVSLGCP KALVDSERIL TQLRMEGYEV VATYEDADVV VVNTCGFIDT AKAESLEVIG EAIKENGKVI VTGCMGVDAS VIRNVHPSVL SVTGPQQYEQ VVNAVHDVVP PRKDHNPLID LVPPQGVKLT PRHYAYLKIS EGCNHSCSFC IIPSMRGKLV SRPVGDVLDE AKRLVKSGVK ELLVISQDTS AYGVDVKYRT GFWDGQPVKT RMTELCQALG SMGVWVRLHY VYPYPHVDEL IPLMAAGKIL PYLDIPFQHA SPKILKLMKR PAFEDKTLAR IKNWREQCPD LIIRSTFIVG FPGETEEDFQ YLLDWLTEAQ LDRVGCFQYS PVEGAPANLL DAAIVPDDVK QDRWDRFMAH QQAISAARLQ MKIGKEIEVL IDEVDDRGAV GRCFFDAPEI DGNVFIGLDD GSTVQPGDKI MCRVTDADEY DLWAEML
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