Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1386 |
Symbol | |
ID | 3366881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1568079 |
End bp | 1569005 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651725 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_234475 |
Protein GI | 66044634 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTTA CTCTCCGTCA GCTCCAGGTA TTTGTGGCCG TCGCCCGGCA GGAAAGCGTC TCCAAAGCCG CAGTACTGCT TTCGCTTTCG CAGTCGGCTG CCAGCACCTC CATCACCGAG CTGGAGCGCC AATCGAGCTG CCAGCTATTT GACCGTGCCG GCAAGCGCCT CAGCCTCAAC GCCACCGGCA GACAATTGCT GCCCCAAGCC GTCGCGCTGC TCGATCAGGC CAAGGAAATC GAAGACCTGC TCAACGGCAA ATCAGGCTTC GGTTCACTGG CGGTCGGGGC GACGCTGACG ATCGGCAATT ACCTGGCGAC CCTGCTGATC GGCGGCTACA TGCAGCGCCA TCCGGAAAGC CAGGTCAAGC TGCATGTCCA GAACACGGCG CATATCGTGC AACAGGTTGC GCACTACGAG ATCGATCTGG GCCTCATCGA AGGCGATTGC AGCCACCCGG ACATCGAAGT GCAATCCTGG GTCGAAGACG AACTTGTGGT GTTCTGCGCC CCGCAGCATC CGCTGGCCAA GCGCGCCCAG GTAACCCTGG AAGAGCTGAC CCATGAAGCC TGGATACTTC GGGAACAGGG CTCAGGCACA CGCCTGACGT TCGATCAGGC GATGCGTCAT CACCGTAACG GGCTGAATGT CCGACTGGAG CTCGAGCACA CCGAAGCCAT CAAACGCGCA GTCGAATCCG GGCTGGGCAT TGGCTGCATT TCCAGACTGG CGCTGCGCGA CGCCTTTCGT CGCGGCAATC TGGTCGAACT GGCCACGCCG GAGCTGGACC TGGCCAGGCA GTTCTACTTC ATCTGGCACA AACAGAAATA CCAGACCTCG GCCATGCGCG AGTTTCTCGA ACTGTGTCGC GCATTCACCG CCGGGGTGCA GCGCAGCGAC GAGATCGTGC TGCCCAGCCT GTATTGA
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Protein sequence | MRFTLRQLQV FVAVARQESV SKAAVLLSLS QSAASTSITE LERQSSCQLF DRAGKRLSLN ATGRQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GGYMQRHPES QVKLHVQNTA HIVQQVAHYE IDLGLIEGDC SHPDIEVQSW VEDELVVFCA PQHPLAKRAQ VTLEELTHEA WILREQGSGT RLTFDQAMRH HRNGLNVRLE LEHTEAIKRA VESGLGIGCI SRLALRDAFR RGNLVELATP ELDLARQFYF IWHKQKYQTS AMREFLELCR AFTAGVQRSD EIVLPSLY
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