Gene Psyr_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1386 
Symbol 
ID3366881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1568079 
End bp1569005 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID637651725 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_234475 
Protein GI66044634 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTA CTCTCCGTCA GCTCCAGGTA TTTGTGGCCG TCGCCCGGCA GGAAAGCGTC 
TCCAAAGCCG CAGTACTGCT TTCGCTTTCG CAGTCGGCTG CCAGCACCTC CATCACCGAG
CTGGAGCGCC AATCGAGCTG CCAGCTATTT GACCGTGCCG GCAAGCGCCT CAGCCTCAAC
GCCACCGGCA GACAATTGCT GCCCCAAGCC GTCGCGCTGC TCGATCAGGC CAAGGAAATC
GAAGACCTGC TCAACGGCAA ATCAGGCTTC GGTTCACTGG CGGTCGGGGC GACGCTGACG
ATCGGCAATT ACCTGGCGAC CCTGCTGATC GGCGGCTACA TGCAGCGCCA TCCGGAAAGC
CAGGTCAAGC TGCATGTCCA GAACACGGCG CATATCGTGC AACAGGTTGC GCACTACGAG
ATCGATCTGG GCCTCATCGA AGGCGATTGC AGCCACCCGG ACATCGAAGT GCAATCCTGG
GTCGAAGACG AACTTGTGGT GTTCTGCGCC CCGCAGCATC CGCTGGCCAA GCGCGCCCAG
GTAACCCTGG AAGAGCTGAC CCATGAAGCC TGGATACTTC GGGAACAGGG CTCAGGCACA
CGCCTGACGT TCGATCAGGC GATGCGTCAT CACCGTAACG GGCTGAATGT CCGACTGGAG
CTCGAGCACA CCGAAGCCAT CAAACGCGCA GTCGAATCCG GGCTGGGCAT TGGCTGCATT
TCCAGACTGG CGCTGCGCGA CGCCTTTCGT CGCGGCAATC TGGTCGAACT GGCCACGCCG
GAGCTGGACC TGGCCAGGCA GTTCTACTTC ATCTGGCACA AACAGAAATA CCAGACCTCG
GCCATGCGCG AGTTTCTCGA ACTGTGTCGC GCATTCACCG CCGGGGTGCA GCGCAGCGAC
GAGATCGTGC TGCCCAGCCT GTATTGA
 
Protein sequence
MRFTLRQLQV FVAVARQESV SKAAVLLSLS QSAASTSITE LERQSSCQLF DRAGKRLSLN 
ATGRQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GGYMQRHPES
QVKLHVQNTA HIVQQVAHYE IDLGLIEGDC SHPDIEVQSW VEDELVVFCA PQHPLAKRAQ
VTLEELTHEA WILREQGSGT RLTFDQAMRH HRNGLNVRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGNLVELATP ELDLARQFYF IWHKQKYQTS AMREFLELCR AFTAGVQRSD
EIVLPSLY