Gene Psyr_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1367 
Symbol 
ID3366862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1550472 
End bp1551584 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID637651706 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_234456 
Protein GI66044615 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGT CGCGCGCTGC TGTCGCTTTT GAAGCCAAAA AGCCATTGGA GATCGTTGAA 
GTCGATGTGG CCATGCCCAA GGCGGGAGAA GTGCTGCTCA GAGTAGTAGC CTCCGGCGTT
TGCCACACCG ATGCCTACAC ATTGTCCGGG GCTGACCCTG AAGGGATTTT TCCGTCGATC
CTCGGCCACG AAGGTGGTGC GATTGTCGAA GCGGTGGGTG AGGGCGTGAC CTCGGTGGTG
GTCGGCGACC ACGTGATTCC GCTGTACACC CCGGAATGCC GTCAGTGCAA GTTCTGCCGC
TCGGGCAAGA CCAACCTGTG CCAGGCGATT CGTGCCACGC AGGGTAAAGG CCTGATGCCG
GATGGCACCA CGCGCTTTTC CTACAAGGGC GAGCCGATTT TCCATTACAT GGGCACCTCG
ACCTTCTCCG AATACACCGT ACTGCCGGAA ATCTCGGTGG CCAAAATCGA CAAGCAGGCA
CCGCTGGAAA AAGTCTGCCT GCTGGGATGT GGCGTCACCA CCGGTATCGG TGCGGTGCTC
AACACCGCCA AGGTCAAGCC TGGTGATACC GTGGCCATCT TCGGTCTGGG CGGTATTGGC
CTCTCGGCAT TGATCGGTGC GGTCAAAGCC AAGGCGGCTC GAATCATCGC CATCGACATC
AACCCGGCCA AGTTCGAGAT CGCCAAACAG CTGGGCGCGA CTGATTGCGT CAATCCGAAG
GATTTCGACC GTCCGATCCA GGAAGTCATC GTCGACATGA CCGATGGCGG CGTCGACTTC
TCGTTTGAGT GCATCGGTAA TGTGCAACTG ATGCGTGCAG CGCTGGAATC CTGCCACAAG
GGCTGGGGCG AGTCGGTCAT CATCGGCGTG GCCGGCGCCG GTCAGGAAAT CGCTACCCGT
CCGTTCCAGC TGGTGACCGG GCGCGTCTGG CGCGGTTCGG CATTTGGCGG CGTGCGTGGC
CGTACCGAAT TGCCGAGCTA TGTGGACATG GCGCAGACCG GAGAAATCCC GCTGGATACG
TTCATCACCC ACACCATGGG CCTGGAGGGA ATCAACAAGG CGTTCGACCT GATGCATGAA
GGCAAAAGCA TCCGCACCGT CATTCATTTT TAA
 
Protein sequence
MIKSRAAVAF EAKKPLEIVE VDVAMPKAGE VLLRVVASGV CHTDAYTLSG ADPEGIFPSI 
LGHEGGAIVE AVGEGVTSVV VGDHVIPLYT PECRQCKFCR SGKTNLCQAI RATQGKGLMP
DGTTRFSYKG EPIFHYMGTS TFSEYTVLPE ISVAKIDKQA PLEKVCLLGC GVTTGIGAVL
NTAKVKPGDT VAIFGLGGIG LSALIGAVKA KAARIIAIDI NPAKFEIAKQ LGATDCVNPK
DFDRPIQEVI VDMTDGGVDF SFECIGNVQL MRAALESCHK GWGESVIIGV AGAGQEIATR
PFQLVTGRVW RGSAFGGVRG RTELPSYVDM AQTGEIPLDT FITHTMGLEG INKAFDLMHE
GKSIRTVIHF