| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1350 |
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| Symbol | |
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| ID | 3366845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1529409 |
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| End bp | 1530761 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651689 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_234439 |
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| Protein GI | 66044598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.512727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.377982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT TATACATGAT TCTCGGCACC CTGATTGCTC TGGGTGTGCT GGTGACCTTC
CACGAATTCG GCCACTTCTG GGTGGCGCGC CGCTGTGGCG TCAAGGTGCT GCGTTTCTCG
GTAGGCTTCG GCACGCCTCT GCTGCGCTGG CATGACCGGC AGGGCACCGA GTACGTCGTC
GCTGCCATTC CTCTGGGCGG CTATGTGAAG ATGCTCGACG AGCGCGAAGG CAATGTTCCG
CCCGAACTCG CTGACCAGTC GTTCAACCGC AAGACAGTAG GGCAGCGCAT CGCGATCGTG
ATTGCCGGCC CGACTGCCAA TTTCATCCTG GCCATCGCAT TTTTCTGGGT GCTGGCGATG
ATGGGCAGCG AGCAGGTGCG CCCCGTTATC GGCGCAGTCG AGTCCGGAAG CATCGCCCAG
CAGGCTGGCC TGACGGCCGG ACAGGAAATC GTTGCTGTCG ATGGCGAGCC TACTTCGGGT
TGGGCCGGGG TCAATCTGCA ACTGGTCCGC CGTCTGGGTG AAAGCGGTAC CATCGCGTTG
AAAGTCAGGG ACCAGGGTTC TACGGTCGAC ACGTCTCGTC AGTTGGTACT GAGTGACTGG
CTGAGAGGCG CAGAAGAGCC TGATCCGATC AAGTCGCTGG GTATTCGCCC GTGGCGTCCG
GCGCTGTTGC CGGTGCTGGC GGAAATCGAT CCGAAAGGTC CGGCGCAGAG CGCAGGGCTC
AAAACGGGTG ATCGTCTCGT TGCGATGGAC GGTCAGCCGC TCGATGAGTG GCAACAGGTT
GTCGATCGGG TGCGCGAGCG TCCCGAAGCG AAGATTTCGC TGCGCATCGA GCGCGACGGG
GTGCAAATGG ACGTGCCGGT GACCCTCGCG GCCAAGGGCG AGGGCAAGGC TGCCGCGGGT
TACCTGGGGG CTGGTGTGAA AGCTGTCGAT TGGCCACCGG AAATGCTGCG CGAGGTCAGC
TACGGGCCTT TCGCGGCGAT GGCCGAGGGT GTGAAGCGCA CCTGGAACAT GAGTGTGCTG
ACCCTGGACT CGCTGAAGAA AATGTTGTTC GGCGAGCTCT CGGTAAAAAA CTTGAGTGGA
CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCGGCCCAGT CGGGCATCGG AGATTTTCTG
AACTTCCTCG CTTATCTGAG TATTAGCCTG GGTGTTCTGA ATCTGCTGCC CATTCCCGTC
CTGGACGGGG GGCATTTGCT GTTTTATCTG ATCGAGTGGG CGCGTGGTCG CCCCCTTTCG
GAAAAGGTTC AAGGTTGGGG GGCGCAGATC GGTATCAGTC TGGTAGTGGG CGTAATGTTG
CTCGCGCTGG TCAACGATCT GGGCCGACTG TAA
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| Protein sequence | MSALYMILGT LIALGVLVTF HEFGHFWVAR RCGVKVLRFS VGFGTPLLRW HDRQGTEYVV
AAIPLGGYVK MLDEREGNVP PELADQSFNR KTVGQRIAIV IAGPTANFIL AIAFFWVLAM
MGSEQVRPVI GAVESGSIAQ QAGLTAGQEI VAVDGEPTSG WAGVNLQLVR RLGESGTIAL
KVRDQGSTVD TSRQLVLSDW LRGAEEPDPI KSLGIRPWRP ALLPVLAEID PKGPAQSAGL
KTGDRLVAMD GQPLDEWQQV VDRVRERPEA KISLRIERDG VQMDVPVTLA AKGEGKAAAG
YLGAGVKAVD WPPEMLREVS YGPFAAMAEG VKRTWNMSVL TLDSLKKMLF GELSVKNLSG
PITIAKVAGA SAQSGIGDFL NFLAYLSISL GVLNLLPIPV LDGGHLLFYL IEWARGRPLS
EKVQGWGAQI GISLVVGVML LALVNDLGRL
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