| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1343 |
|---|
| Symbol | rpsB |
|---|
| ID | 3366838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1523217 |
|---|
| End bp | 1523960 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637651682 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_234432 |
|---|
| Protein GI | 66044591 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.477312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAG TCAATATGCG CGATATGCTG AAGGCTGGTT GCCACTTCGG TCACCAGACC
CGTTACTGGA ATCCGAAAAT GGGTAAATAC ATTTTCGGCG CGCGTAACAA GATTCACATC
ATCAACCTTG AAAAAACCCT GCCTATGTTC AACGAAGCGC TGACTTTCGT TGAGCGCCTG
GCTTCGGGCA AAAACAAGAT TCTGTTCGTC GGCACCAAGC GTTCCGCTGG CAAGATCGTT
GCTGAAGAAG CAGCACGTTG CGGTTCGCCG TACGTCGACC ATCGCTGGTT GGGCGGCATG
CTGACCAACT TCAAGACCAT CCGTCAGTCG ATCAAGCGTC TGCGCGAGCT GGAAGTACAG
GCTGAAGACG GTACTTTCGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG TACCCGTGAT
CTGGAAAAAC TGGATCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGTCT GCCGGACGCT
CTGTTCGTTA TCGACGTTGA TCACGAGCGC ATCGCGATCA CCGAAGCCAA CAAGCTGGGC
ATCCCGGTTA TCGGCGTCGT CGATACCAAC AGCAGCCCGG AAGGCGTTGA CTACATCATC
CCTGGCAACG ATGACGCAAT CCGCGCCATC CAGCTGTACA TGGGTTCGAT GGCTGATGCT
GTTATCCGTG GTCGTAACAA TGTTGCTGGC GGCACCGACG TCTTCGTCGA AGAAGCTCCA
GCTGCAGCTG CTGTAGAAGG CTGA
|
|---|
| Protein sequence | MSQVNMRDML KAGCHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NEALTFVERL
ASGKNKILFV GTKRSAGKIV AEEAARCGSP YVDHRWLGGM LTNFKTIRQS IKRLRELEVQ
AEDGTFAKLT KKEALMRTRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG
IPVIGVVDTN SSPEGVDYII PGNDDAIRAI QLYMGSMADA VIRGRNNVAG GTDVFVEEAP
AAAAVEG
|
|---|
| |