Gene Psyr_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1330 
Symbol 
ID3366825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1507802 
End bp1508611 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID637651669 
ProductrRNA (guanine-N(1)-)-methyltransferase 
Protein accessionYP_234419 
Protein GI66044578 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.236151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0256907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCT GCCCGATCTG CTCAGCGCCG CTCAGCACTG CCGACAACGG CGTGGTGTGC 
CCGGCCAATC ATCGTTTCGA CCGAGCCCGT CAGGGTTATC TGAACCTGTT GCCGGTGCAG
CACAAGAACA GCCGCGACCC GGGCGACAAT CAGGCCATGG TCGAGGCGCG ACGCGATTTT
CTCAACGCCG GGCACTACGC GCCGGTAGCC CGGCGACTGG CTGAACTGGC CGCCGAGCGA
TCCCCCGCGC ATTGGCTGGA CATCGGTTGT GGCGAAGGTT ATTACACCGC GCAGATTGCC
GAAGCCTTGC CGCATGCCGA TGGCTATGCG CTGGACATCT CCCGCGAGGC GGTCAAACGC
GCCTGTCGTC GTGATCCGGC GCTGACCTGG ATGGTCGCCA GCATGGCCCG TGTGCCACTT
GCGGATGCCA GCTGCCAGTT TCTGGCCAGC GTGTTCAGCC CGCTGGACTG GCAGGAAGCC
AAGCGCTTGC TGACCCCAGG CGGCGGGCTG ATGCGGGTCG GCCCGACCAA TGAGCATCTG
ATGGAGCTGC GTCAGCGGCT CTATGATGAA GTGCGCGATT ACGCCGACGA CAAGCACCTG
TCGCTGGTGC CGCAAGGCAT GCAGTTGCAA CACAGCGAAA CCCTGCGCTA CACGCTGAAG
CTGATCGACG GCCAGTCCCG CGCCGATCTG CTGGCCATGA CACCGCACGG CTGGCGCGCC
AGCGCCGAAC GTCGGGCAGC GGTCATCGAG CAACCAGGAC CTTTCAAGGT CACCGTTTCC
ATGCGCTACG ATTATTTCGT GCTGCAATAA
 
Protein sequence
MLTCPICSAP LSTADNGVVC PANHRFDRAR QGYLNLLPVQ HKNSRDPGDN QAMVEARRDF 
LNAGHYAPVA RRLAELAAER SPAHWLDIGC GEGYYTAQIA EALPHADGYA LDISREAVKR
ACRRDPALTW MVASMARVPL ADASCQFLAS VFSPLDWQEA KRLLTPGGGL MRVGPTNEHL
MELRQRLYDE VRDYADDKHL SLVPQGMQLQ HSETLRYTLK LIDGQSRADL LAMTPHGWRA
SAERRAAVIE QPGPFKVTVS MRYDYFVLQ