| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1307 |
|---|
| Symbol | |
|---|
| ID | 3366802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1482580 |
|---|
| End bp | 1484949 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637651646 |
|---|
| Product | response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt |
|---|
| Protein accession | YP_234396 |
|---|
| Protein GI | 66044555 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.105152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00575971 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAG ATCAAATGCG TGACGCCTCG CTGTTCGAAC TGTTCACGCT GGAAGCCGAT
GCGCAGACCC AGGTACTGAG TGCCGGCCTG CTGGCACTCG AACGTAACCC GACCCAGGCG
GATCAGCTGG AAGCCTGCAT GCGTGCCGCT CATTCGCTCA AGGGCGCAGC GCGGATTGTC
GGCGTCGATT TCGGCGTGAG CGTCGCGCAT GTGATGGAAG ATTGTCTGGT CAGCGCGCAG
GAAGGGCGTC TGCTGCTTCA GGCCGAGCAT ATCGATGCGC TGCTGTCGGG GACCGACCTG
TTGATGCGTA TCGCCACGCC TGGCGGCGAC AGCGTTGGTC AGCCTGATAT CGACAGTTAT
GTCGAAAGGC TCAATACGTT GCTGGCTTCC GGTGCTGGCG CGGCGCGAAC GGTCAGTACG
CCACTGCCGG ACCCGGCCTC GGACGCTTTA CTCGCCAGCG CGATGCTGCA GTTCGAGACG
CCCAGCGCGG CAGTTGTGCC GGAGTCTGTG CCCGAGCCCT TGGCCGCAGA CTTGCCTGCG
TCCGCCAATC CAGCCGCCAT GCCGGCTGCG GAACCTGAAG CACCGTTCAC GCCATTGCGT
GAACGGCGTG TGGCCGAAGG TGGCGAGCGC GTGTTGCGAG TCACCGCCGA GCGCCTCAAC
GGGCTGCTGG ACATGTCCAG CAAATCGCTG GTCGAGACTC AGCGACTCAA GCCGCTGCTG
GCCGGTATGC AGCGGCTCAA GCGTCTGCAA AGCAGCAGTG ATCGTGCGCT TGAAGTGCTG
GGCGCCAGCT TCGGCGAGGA AGGTCCTTCG GCTGATGTGC AAAAAGCCCT GGAAGACGCG
CGTAGCCTCT TGTCCCAGGC GCAGCAGGTG TTGGTCCGGC ACACTGCCGA GCTGGATGAA
TTCGGCTGGC AGTCGGCGCA ACGTGCGCAG TTGTTATACG ACACGGCACT GGCCTGCCGG
ATGCGACCTT TCGCCGATGT GCTGAACGGC CAGGCGCGCA TGGTTCGCGA CCTGGGGCGT
GAACTGGGCA AACAGGTCCG CTTGCAGATC GAAGGCGAGA AGACGCAGGT CGATCGCGAT
GTGCTGGAAA AGCTCGATGC GCCATTGACC CATCTGTTGC GCAACGCCGT GGACCACGGC
ATCGAATCGC CCGAGAAGCG CGTGGCGTCC GGCAAGGACC CTGAAGGTCT GATTCGTCTG
CAGGCCTCGC ATCAGGCCGG CTTGCTGGTC GTCGAGTTGA GCGATGACGG TGGCGGTGTG
GACCTTGAAC GTGTGCGCCA GAGCATCGTC GACCGCAAGC TTTCTCCTGC CGAGACCGCT
GCGCAGTTGA GCGAGGAGGA ACTGCTGAGT TTCCTGTTCC TGCCGGGCTT CAGCATGCGC
GACAAGGTCA CGCAGATTTC CGGCCGTGGT GTCGGCCTCG ATGCCGTGCA GCATATGGTT
CGCCAGATGC ACGGCAGCGT CGAGCTGCAG CAATGGGCAG GCGAGGGCAG TCGCTTCAGG
ATAGAAATGC CGCTGACGCT TTCAGTGGTA CGCAGCCTGG TCGTGGAAGT GGGCGGTGAA
GCCTATGCCT TTCCGCTGGC GCATATCGAG CGCATGCGCG ACCTGCAGCC TGACGATATT
CTGCAACTGG AAGGGCGTCA GCACTTCTGG GATGAAGAGC GGCATGTCGG TCTGGTTTCG
GCCAGCCAGC TGTTGAACCG GCCACCCGCG CAGAAGGCCG GAGAAACGCT CAAGGTCGTG
GTGATTCGCG AGCGCGATGC GGTTTATGGC GTGGCCGTCG AACGCTTCAT CGGTGAGCGT
ACGCTGGTGG TGATGCCGCT CGATGCGCGC CTTGGCAAGG TCCAGGACGT GTCGGCAGGG
GCCTTGCTCG ACGACGGTTC AGTGGTGTTG ATCATCGATG TCGAAGATAT GCTGCGCTCG
GTGGAAAAAC TCCTGAATAC CGGCCGTCTG GAGCGCATCG ACCGGCGCGC TCGTCAGGCA
GATCAGGTGT CACGCAAACG CGTGCTGGTC GTCGATGATT CTTTGACCGT TCGCGAGCTG
GAACGCAAGC TGCTGGTCAG TCGCGGTTAC GAAGTATCGG TGGCCGTGGA CGGAATGGAT
GGCTGGAATG CCCTGCGCGC CGAGGACTTC GACCTGCTGA TCACCGACAT CGACATGCCG
CGTATGGACG GTATCGAACT GGTGACCCTG TTGCGCCGCG ATACCCGCTT GCAGTCCTTG
CCGGTCATGG TCGTGTCCTA CAAGGACCGC GAAGAAGACC GGCGTCGCGG CCTGGACGCC
GGCGCCGATT ATTACCTGGC CAAGGCCAGT TTCCACGATG ATGCCTTGCT CGACGCTGTC
GTCGAATTGA TAGGAGACGC GCAAGGATGA
|
|---|
| Protein sequence | MTPDQMRDAS LFELFTLEAD AQTQVLSAGL LALERNPTQA DQLEACMRAA HSLKGAARIV
GVDFGVSVAH VMEDCLVSAQ EGRLLLQAEH IDALLSGTDL LMRIATPGGD SVGQPDIDSY
VERLNTLLAS GAGAARTVST PLPDPASDAL LASAMLQFET PSAAVVPESV PEPLAADLPA
SANPAAMPAA EPEAPFTPLR ERRVAEGGER VLRVTAERLN GLLDMSSKSL VETQRLKPLL
AGMQRLKRLQ SSSDRALEVL GASFGEEGPS ADVQKALEDA RSLLSQAQQV LVRHTAELDE
FGWQSAQRAQ LLYDTALACR MRPFADVLNG QARMVRDLGR ELGKQVRLQI EGEKTQVDRD
VLEKLDAPLT HLLRNAVDHG IESPEKRVAS GKDPEGLIRL QASHQAGLLV VELSDDGGGV
DLERVRQSIV DRKLSPAETA AQLSEEELLS FLFLPGFSMR DKVTQISGRG VGLDAVQHMV
RQMHGSVELQ QWAGEGSRFR IEMPLTLSVV RSLVVEVGGE AYAFPLAHIE RMRDLQPDDI
LQLEGRQHFW DEERHVGLVS ASQLLNRPPA QKAGETLKVV VIRERDAVYG VAVERFIGER
TLVVMPLDAR LGKVQDVSAG ALLDDGSVVL IIDVEDMLRS VEKLLNTGRL ERIDRRARQA
DQVSRKRVLV VDDSLTVREL ERKLLVSRGY EVSVAVDGMD GWNALRAEDF DLLITDIDMP
RMDGIELVTL LRRDTRLQSL PVMVVSYKDR EEDRRRGLDA GADYYLAKAS FHDDALLDAV
VELIGDAQG
|
|---|
| |