Gene Psyr_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1304 
Symbol 
ID3366799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1480081 
End bp1480617 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID637651643 
ProductCheW-like protein 
Protein accessionYP_234393 
Protein GI66044552 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00117926 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGATC AATCGCCGAG GCGCAATGGC CCGCCACTGA CCGCCAGCAA GCTCTTTCTG 
CTGTTTTGCA TAGGCGAAGA CCGCTATGCA CTGGACGCGA CCGAGATCGC TGAAATCCTG
CCGCGGGTGA AGCTCAAGAC CATTGCCCAG GCACCTCACT GGGTGGCGGG AATCTTTGCC
CATCGCGGCG AGATCGTCCC GGTGATTGAC ATCAGTGCGC TGAACTCCGG CGAGCCGGCG
CGCGCTCGTA CCAGTACGCG CATGGTGCTG GTGCATTATC GCTACGACGA TGCGCACCCG
GCGCAGTTGC TCGGACTGAT TCTGGAACAG GCGACAGAGA CGCTGCGCTG CCCTGTGGCG
CAGTTCAAGG CCTATGGGCT GGACAATCGC CTGTCGCCTT ACCTGGGGCC GGTGCGTGAG
GATGAGCAGG GCCTGTTGCA ATGGATTCAT GTTCACGAAC TGTTGAGCGA GCCGGTGCGC
GAGTTGTTGT ACCCGGTGCC GCCGATTGAC CTTGAACTGC TTGAGGACGC GCAATGA
 
Protein sequence
MSDQSPRRNG PPLTASKLFL LFCIGEDRYA LDATEIAEIL PRVKLKTIAQ APHWVAGIFA 
HRGEIVPVID ISALNSGEPA RARTSTRMVL VHYRYDDAHP AQLLGLILEQ ATETLRCPVA
QFKAYGLDNR LSPYLGPVRE DEQGLLQWIH VHELLSEPVR ELLYPVPPID LELLEDAQ