Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1289 |
Symbol | |
ID | 3366784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1453992 |
End bp | 1454732 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651628 |
Product | glutaredoxin |
Protein accession | YP_234378 |
Protein GI | 66044537 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000448477 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.544286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTGC CACAGATTTT CGCTGCCGCG GCTTTGATGC TGGCCGGCAC CTTCAGTATG TCTGCCCTGG CTGATGCAGC CCCCGATCAG GCTATCCGCA AGACGCTCGA CTCGCTGGAA TTGCAGCTGC CGGTCGAGAG TATCTCGCCG AGCCCGCTCA ATGGCCTCTA TGAAGTGAAG CTCAAGGGCG GCCGCGTCCT GTACGCCAGC GCCGACGGTC AGTTCGTGGT TCAGGGCTAT CTGTTTCAGG TGCAGAACGG CAAGCCGGTC AACCTGACCG AGAAGACCGA ACGTCTGGCC ATTTCCAAGA CCATCAACGC CATTCCTGCG TCCGAGATGG TGATCTATCC GGCGGTGGGC GAGACCAAGT CGCACATCAC CGTATTCACC GACACGACCT GCCCGTATTG CCACAAGCTG CACGAAGAAG TCGGCCAGCT GAACAAGATG GGTGTCGAAG TCCGTTACCT GGCATTCCCG CGTCAGGGGC TTGGTTCTCC GGGTGACGAG CAGTTGCAGG CCGTGTGGTG TTCCAAGGAT CGCAAGGGCG CGATGGACCG TATGGTCGAT GGCAAGGACA TCAAGGCCGC CAAATGCGAC AATCCGGTCA GCAAGCAATA TGAGCTCGGT CAGTCGATCG GCGTCAACGG CACGCCTGCG ATTGTCCTCG CTGACGGTCA GGTGATTCCG GGTTATCAGC CTGCGGCTCA GGTTGCCAAG CTGGCATTGA GCGCCAAATA A
|
Protein sequence | MRLPQIFAAA ALMLAGTFSM SALADAAPDQ AIRKTLDSLE LQLPVESISP SPLNGLYEVK LKGGRVLYAS ADGQFVVQGY LFQVQNGKPV NLTEKTERLA ISKTINAIPA SEMVIYPAVG ETKSHITVFT DTTCPYCHKL HEEVGQLNKM GVEVRYLAFP RQGLGSPGDE QLQAVWCSKD RKGAMDRMVD GKDIKAAKCD NPVSKQYELG QSIGVNGTPA IVLADGQVIP GYQPAAQVAK LALSAK
|
| |