| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1285 |
|---|
| Symbol | rplS |
|---|
| ID | 3366780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1450578 |
|---|
| End bp | 1450928 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637651624 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_234374 |
|---|
| Protein GI | 66044533 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACA AAATCATTCT TGCCCTCGAA GCAGAGCAGA TGACCAAAGA GATCCCTACC
TTTGCACCAG GCGACACCAT TGTCGTCCAG GTTAAAGTGA AGGAAGGCGA CCGCGCTCGT
CTGCAAGCAT TCGAAGGCGT TGTCATTGCC AAGCGTAACC GTGGCGTGAA CAGTGCTTTC
ACTGTTCGTA AAATCTCCAA CGGTGTTGGC GTTGAGCGTA CTTTCCAGAC TTACAGCCCG
CAAATCGACA GCATGGCTGT GAAACGTCGC GGTGACGTTC GCAAGGCCAA ACTGTACTAC
CTGCGTGACC TGTCCGGTAA AGCAGCGCGC ATCAAGGAAA AACTGTCCTG A
|
|---|
| Protein sequence | MTNKIILALE AEQMTKEIPT FAPGDTIVVQ VKVKEGDRAR LQAFEGVVIA KRNRGVNSAF
TVRKISNGVG VERTFQTYSP QIDSMAVKRR GDVRKAKLYY LRDLSGKAAR IKEKLS
|
|---|
| |