Gene Psyr_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1280 
Symbol 
ID3366775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1446323 
End bp1447177 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content59% 
IMG OID637651619 
Productcytochrome c assembly protein 
Protein accessionYP_234369 
Protein GI66044528 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT CAGCGTCTTT TCAGGCCCGT CCATCAGGAT CTATGTCCCC TTTGCCACCC 
AGCCTGCTTC CCAGCCTCGC CGCCGCCATC ATTTATGCCG CTGCGACCGT CTATCAGAGC
CTGCGTCTGA GCCAGGCCGT CAAGCCCGAC AAGCGGCTGC TTTGCCTGCT TGGAGCGTTG
GCGGTCATCG CACATGCCAT TGGTCTGTTT TCCCAATTGA CGCATTCCGT CGGTCTTGGT
CTGGACTTCT TCAACTCCGC CAGCCTTATC GCGGCGTCGG TGATCGTCGT CACCCTGATC
GCCACATCGC GCATCCCGGT GGAAAACCTG CTGGTGTTGT TGTTCCCTTT AGGGATGGTC
ACTGTACTGC TCGCCCAGTT CGCCCCTAGC GGCACTGTGC AGCCGATCAT GGAAGAGCCC
GGCATCCTCA GCCATATCCT GCTCTCTCTG CTGGCTTACG GGATGTTTAC CATTGCTGCA
TTCCAGGCGC TGCTGTTGCT GTTGCAGGAC TACCGCCTCA AGCACAAGCA CCCTTCCGGG
CTGATCAAGA ACTTCCCGCC GCTGCAAACC ATGGAAAGTC TGCTGTTCGG CTTTCTGTGG
GCTGGCTGGT CGCTGCTCTC GCTGTCGCTG ATTTCCGGCT GGCTGTTCGT CGAAAACCTG
TTTGCCCAGC ATCTGGTGCA CAAGACCCTG CTGGCCTGTC TGGCCTGGAT AGTGTTCAGT
GTGCTGCTGT GGGGGCGTAA CCGCCTTGGA TGGCGTGGTC ATAAGGCCAT TCGCTGGACA
CTGGGCGGTT TCTGCCTGCT GATGCTCGCC TATTTCGGCA GCAAGCTGGT ACGCGAATTC
ATCCTGCACA TCTGA
 
Protein sequence
MPNSASFQAR PSGSMSPLPP SLLPSLAAAI IYAAATVYQS LRLSQAVKPD KRLLCLLGAL 
AVIAHAIGLF SQLTHSVGLG LDFFNSASLI AASVIVVTLI ATSRIPVENL LVLLFPLGMV
TVLLAQFAPS GTVQPIMEEP GILSHILLSL LAYGMFTIAA FQALLLLLQD YRLKHKHPSG
LIKNFPPLQT MESLLFGFLW AGWSLLSLSL ISGWLFVENL FAQHLVHKTL LACLAWIVFS
VLLWGRNRLG WRGHKAIRWT LGGFCLLMLA YFGSKLVREF ILHI