Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1280 |
Symbol | |
ID | 3366775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1446323 |
End bp | 1447177 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651619 |
Product | cytochrome c assembly protein |
Protein accession | YP_234369 |
Protein GI | 66044528 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT CAGCGTCTTT TCAGGCCCGT CCATCAGGAT CTATGTCCCC TTTGCCACCC AGCCTGCTTC CCAGCCTCGC CGCCGCCATC ATTTATGCCG CTGCGACCGT CTATCAGAGC CTGCGTCTGA GCCAGGCCGT CAAGCCCGAC AAGCGGCTGC TTTGCCTGCT TGGAGCGTTG GCGGTCATCG CACATGCCAT TGGTCTGTTT TCCCAATTGA CGCATTCCGT CGGTCTTGGT CTGGACTTCT TCAACTCCGC CAGCCTTATC GCGGCGTCGG TGATCGTCGT CACCCTGATC GCCACATCGC GCATCCCGGT GGAAAACCTG CTGGTGTTGT TGTTCCCTTT AGGGATGGTC ACTGTACTGC TCGCCCAGTT CGCCCCTAGC GGCACTGTGC AGCCGATCAT GGAAGAGCCC GGCATCCTCA GCCATATCCT GCTCTCTCTG CTGGCTTACG GGATGTTTAC CATTGCTGCA TTCCAGGCGC TGCTGTTGCT GTTGCAGGAC TACCGCCTCA AGCACAAGCA CCCTTCCGGG CTGATCAAGA ACTTCCCGCC GCTGCAAACC ATGGAAAGTC TGCTGTTCGG CTTTCTGTGG GCTGGCTGGT CGCTGCTCTC GCTGTCGCTG ATTTCCGGCT GGCTGTTCGT CGAAAACCTG TTTGCCCAGC ATCTGGTGCA CAAGACCCTG CTGGCCTGTC TGGCCTGGAT AGTGTTCAGT GTGCTGCTGT GGGGGCGTAA CCGCCTTGGA TGGCGTGGTC ATAAGGCCAT TCGCTGGACA CTGGGCGGTT TCTGCCTGCT GATGCTCGCC TATTTCGGCA GCAAGCTGGT ACGCGAATTC ATCCTGCACA TCTGA
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Protein sequence | MPNSASFQAR PSGSMSPLPP SLLPSLAAAI IYAAATVYQS LRLSQAVKPD KRLLCLLGAL AVIAHAIGLF SQLTHSVGLG LDFFNSASLI AASVIVVTLI ATSRIPVENL LVLLFPLGMV TVLLAQFAPS GTVQPIMEEP GILSHILLSL LAYGMFTIAA FQALLLLLQD YRLKHKHPSG LIKNFPPLQT MESLLFGFLW AGWSLLSLSL ISGWLFVENL FAQHLVHKTL LACLAWIVFS VLLWGRNRLG WRGHKAIRWT LGGFCLLMLA YFGSKLVREF ILHI
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