| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1259 |
|---|
| Symbol | xseA |
|---|
| ID | 3366754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1415962 |
|---|
| End bp | 1417353 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637651598 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_234348 |
|---|
| Protein GI | 66044507 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCCG ACATGATCAA AGACCCTTTC GCAAGACTCG GCCTCGACCG GGAAGTCCTT
ACTGTCAGCC AGCTCAACGG CCGCGCCCGC GTGCTGCTGG AAGACGTGTT CAGCAGCATC
TGGGTCGAGG GCGAGATCTC CAACCTCTCG CGCCCGGCCT CGGGCCATGT GTACTTCACG
CTGAAGGACT CTGGCGCGCA GGTCCGCTGC GCGTTGTTCC GGCAGAGCGC AGCGCGGGTG
CGTCAGGCGC TCAAGGACGG CTTGCAGGTC AAGGTGCGCG GCAAGGTTTC GCTGTTTGAG
GGCCGCGGCG ACTATCAGCT GATTCTCGAT ACCGTGGAAC CTGCCGGTGA CGGTGCATTG
CGCCTGGCGT TCGATGCGCT GAAAGCCAAG CTCAGCGACG AAGGCCTGTT CAGCGCCGAG
CGCAAGGTCG CTCTGCCGCT GCACCCGCAA CGTATCGGGA TCATCAGCTC ACCGACCGGT
GCGGTGATCC GCGACATCAT CAGCGTGTTC CGTCGTCGCG CGCCGCGGGT CGAGCTGACC
TTGATTCCCA CCGCCGTTCA GGGCCGCGAG GCGATCAACC AGATTGTCCG CGCACTGAAG
CTGGCCGACA GCAGAGGCTT CGATGCGCTG ATCCTGGCCC GTGGCGGCGG CTCGCTGGAG
GACCTGTGGT GCTTCAACGA AGAAGCCGTC GCCCGCGCCA TCGACGCGTG CGTGACGCCG
ATTGTCAGCG CTGTCGGGCA TGAAACCGAT GTGTCCATCA GCGACTTTGT CGCCGACGTG
CGCGCACCGA CGCCCTCCGC TGCCGCCGAA CTGCTCGCCC CGGATTCCAG CGACCTGCAT
CGACGCGTCG ACAACCTGCA CCGGCGACTG GTCAGCCGCA TGCAGGACCG ACTGATGCGC
GAGCGGCTGC GTCTCGAGGG TATTTCCCGG CGTCTGCGCC ACCCTGGCGA GCGCTTGCGT
CAGCAGTCGC AACGCCTGGA TGACCTGGAC ATGCGCCTGC GCCGCGCCCT TGAACAGACC
ATGCATCAAC GTCAGCTGCG TCTGGCGCAC ATGCAAAGCC GCCTTGCTGC CCAGCATCCA
GGCCGGACCC TGGCCTTTTT GCGCCAGCGT CTGGATGCCT TGGCCGAGCG TCTGCCGAGA
GCCATTCGCG AACAGATCAA GGCGCGCAAG CTTCAATTAC AAAGTCAGGT GCAGACCCTC
AACGTGGTCA GCCCGCTCGC CACACTGGGA CGCGGTTACA GCATTCTGCT CGACGAGCGC
GGCCACGCGA TTCGTAACGC TGCACAGACG CAGACCGGCC AACGGCTTAC CGCCAGGCTC
GGCGAAGGCG AACTGCACGT GCGTGTCGAA GACAATCACC TCACACCCGT GACCCTCTCC
CTTCTGGACT GA
|
|---|
| Protein sequence | MMPDMIKDPF ARLGLDREVL TVSQLNGRAR VLLEDVFSSI WVEGEISNLS RPASGHVYFT
LKDSGAQVRC ALFRQSAARV RQALKDGLQV KVRGKVSLFE GRGDYQLILD TVEPAGDGAL
RLAFDALKAK LSDEGLFSAE RKVALPLHPQ RIGIISSPTG AVIRDIISVF RRRAPRVELT
LIPTAVQGRE AINQIVRALK LADSRGFDAL ILARGGGSLE DLWCFNEEAV ARAIDACVTP
IVSAVGHETD VSISDFVADV RAPTPSAAAE LLAPDSSDLH RRVDNLHRRL VSRMQDRLMR
ERLRLEGISR RLRHPGERLR QQSQRLDDLD MRLRRALEQT MHQRQLRLAH MQSRLAAQHP
GRTLAFLRQR LDALAERLPR AIREQIKARK LQLQSQVQTL NVVSPLATLG RGYSILLDER
GHAIRNAAQT QTGQRLTARL GEGELHVRVE DNHLTPVTLS LLD
|
|---|
| |