Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1249 |
Symbol | hisS |
ID | 3366744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1404477 |
End bp | 1405766 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651588 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_234338 |
Protein GI | 66044497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0462121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTAAGT CTCTACAAGC CATTCGTGGC ATGAACGACA TTCTGCCCGA GCAGACGCCG CTGTGGCGTC ACTTCGAAGG CACCGTTGCC CGTCTGCTGG ATAACTACGG TTACCGGCAG ATTCGTATGC CTATCGTCGA ATTCACCGAG CTGTTCAAGC GCTCCATCGG TGAAGTGACC GACATCGTCG AGAAAGAGAT GTACACCTTC GCCGACCGCA ACGGCGACTC TCTGACCCTG CGCCCTGAAG GCACTGCCGC GTGCGTGCGT GCGGTCCTCG AGCACGGCAT CACTGGCGGC GGCCAGGTTC AGAAACTGTG GTACATCGGT CCGATGTTCC GTCACGAGCG TCCGCAGAAA GGCCGTTATC GTCAGTTTCA CCAGATCGGT GTCGAGGTCT TCAACCTGGA CGGTCCGGAT ATCGATGCCG AACTGATTGT CATGACCTGG CGCCTGTGGG GCCTGCTGGG CATTCGCGAC GCCGTCAAGC TCGAGCTGAA CAGCCTGGGC ACCAGCGAGG CGCGTGCGCG TTATCGCGAG GCGCTGGTCG AATACCTCTC GGCACGTCTC GACCAGCTGG ACGAAGACAG CCAGCGCCGA CTGAAAACCA ACCCGCTTCG CGTGCTGGAC ACCAAGCACC CTGAAACCCA GGCTGTGCTG GTCGATGCGC CGAAACTGGC GGACTATCTG GATGACGAAT CCCGCGTTCA CTTCGAAGGC CTGAAGGCCC GTCTGGATGC CGCCGGTATT CCTTATGTGA TCAATCCCAA GCTGGTGCGT GGCCTGGATT ACTACAGCAA GACCGTTTTC GAGTGGGTCA CCGACCAACT CGGTGCCCAG GGTACGGTCT GTGCGGGCGG TCGTTACGAC GGTCTGGTCG AGCAGATGGG CGGCAAGCCT ACTGCAGGCG TCGGTTTCGC GATGGGCATC GAGCGACTGG TGCTGCTGCT CGAAACCCTC GAGCAGGTGC CGGAAGAGAT TGCCCGTCAG GTCGATGTCT ACCTGTGCGC ATTTGGCGAA GCCGCCGAGC TGGCTGCGCT GGCACTGACC GAAAAGGTGC GTGATCAGCT GCCGACTCTG CGGTTGCAGG TCAACGCCGG TGCCGGCAGC TTCAAAAGCC AGTTCAAGAA AGCCGACAAG AGCGGTGCGC TGTACGCGCT GATCCTCGGC GAAGAAGAAC TGGCGGCGAA GGTCATTGGC GTCAAACCCC TGCGCGGTCA GGGTGAACAA CAAAATATTG CCTGGGATGC TCTGTCGGAG CACCTGGCCT CCTGCGTCGT GCAGGGTTGA
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Protein sequence | MSKSLQAIRG MNDILPEQTP LWRHFEGTVA RLLDNYGYRQ IRMPIVEFTE LFKRSIGEVT DIVEKEMYTF ADRNGDSLTL RPEGTAACVR AVLEHGITGG GQVQKLWYIG PMFRHERPQK GRYRQFHQIG VEVFNLDGPD IDAELIVMTW RLWGLLGIRD AVKLELNSLG TSEARARYRE ALVEYLSARL DQLDEDSQRR LKTNPLRVLD TKHPETQAVL VDAPKLADYL DDESRVHFEG LKARLDAAGI PYVINPKLVR GLDYYSKTVF EWVTDQLGAQ GTVCAGGRYD GLVEQMGGKP TAGVGFAMGI ERLVLLLETL EQVPEEIARQ VDVYLCAFGE AAELAALALT EKVRDQLPTL RLQVNAGAGS FKSQFKKADK SGALYALILG EEELAAKVIG VKPLRGQGEQ QNIAWDALSE HLASCVVQG
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