Gene Psyr_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1249 
SymbolhisS 
ID3366744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1404477 
End bp1405766 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID637651588 
Producthistidyl-tRNA synthetase 
Protein accessionYP_234338 
Protein GI66044497 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0462121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAGT CTCTACAAGC CATTCGTGGC ATGAACGACA TTCTGCCCGA GCAGACGCCG 
CTGTGGCGTC ACTTCGAAGG CACCGTTGCC CGTCTGCTGG ATAACTACGG TTACCGGCAG
ATTCGTATGC CTATCGTCGA ATTCACCGAG CTGTTCAAGC GCTCCATCGG TGAAGTGACC
GACATCGTCG AGAAAGAGAT GTACACCTTC GCCGACCGCA ACGGCGACTC TCTGACCCTG
CGCCCTGAAG GCACTGCCGC GTGCGTGCGT GCGGTCCTCG AGCACGGCAT CACTGGCGGC
GGCCAGGTTC AGAAACTGTG GTACATCGGT CCGATGTTCC GTCACGAGCG TCCGCAGAAA
GGCCGTTATC GTCAGTTTCA CCAGATCGGT GTCGAGGTCT TCAACCTGGA CGGTCCGGAT
ATCGATGCCG AACTGATTGT CATGACCTGG CGCCTGTGGG GCCTGCTGGG CATTCGCGAC
GCCGTCAAGC TCGAGCTGAA CAGCCTGGGC ACCAGCGAGG CGCGTGCGCG TTATCGCGAG
GCGCTGGTCG AATACCTCTC GGCACGTCTC GACCAGCTGG ACGAAGACAG CCAGCGCCGA
CTGAAAACCA ACCCGCTTCG CGTGCTGGAC ACCAAGCACC CTGAAACCCA GGCTGTGCTG
GTCGATGCGC CGAAACTGGC GGACTATCTG GATGACGAAT CCCGCGTTCA CTTCGAAGGC
CTGAAGGCCC GTCTGGATGC CGCCGGTATT CCTTATGTGA TCAATCCCAA GCTGGTGCGT
GGCCTGGATT ACTACAGCAA GACCGTTTTC GAGTGGGTCA CCGACCAACT CGGTGCCCAG
GGTACGGTCT GTGCGGGCGG TCGTTACGAC GGTCTGGTCG AGCAGATGGG CGGCAAGCCT
ACTGCAGGCG TCGGTTTCGC GATGGGCATC GAGCGACTGG TGCTGCTGCT CGAAACCCTC
GAGCAGGTGC CGGAAGAGAT TGCCCGTCAG GTCGATGTCT ACCTGTGCGC ATTTGGCGAA
GCCGCCGAGC TGGCTGCGCT GGCACTGACC GAAAAGGTGC GTGATCAGCT GCCGACTCTG
CGGTTGCAGG TCAACGCCGG TGCCGGCAGC TTCAAAAGCC AGTTCAAGAA AGCCGACAAG
AGCGGTGCGC TGTACGCGCT GATCCTCGGC GAAGAAGAAC TGGCGGCGAA GGTCATTGGC
GTCAAACCCC TGCGCGGTCA GGGTGAACAA CAAAATATTG CCTGGGATGC TCTGTCGGAG
CACCTGGCCT CCTGCGTCGT GCAGGGTTGA
 
Protein sequence
MSKSLQAIRG MNDILPEQTP LWRHFEGTVA RLLDNYGYRQ IRMPIVEFTE LFKRSIGEVT 
DIVEKEMYTF ADRNGDSLTL RPEGTAACVR AVLEHGITGG GQVQKLWYIG PMFRHERPQK
GRYRQFHQIG VEVFNLDGPD IDAELIVMTW RLWGLLGIRD AVKLELNSLG TSEARARYRE
ALVEYLSARL DQLDEDSQRR LKTNPLRVLD TKHPETQAVL VDAPKLADYL DDESRVHFEG
LKARLDAAGI PYVINPKLVR GLDYYSKTVF EWVTDQLGAQ GTVCAGGRYD GLVEQMGGKP
TAGVGFAMGI ERLVLLLETL EQVPEEIARQ VDVYLCAFGE AAELAALALT EKVRDQLPTL
RLQVNAGAGS FKSQFKKADK SGALYALILG EEELAAKVIG VKPLRGQGEQ QNIAWDALSE
HLASCVVQG